KEGG   Acidiferrobacter thiooxydans: A9R16_013300
Entry
A9R16_013300      CDS       T07877                                 
Name
(GenBank) CRISPR-associated endonuclease Cas3''
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
aty  Acidiferrobacter thiooxydans
Brite
KEGG Orthology (KO) [BR:aty00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:aty02048]
    A9R16_013300
Enzymes [BR:aty01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A9R16_013300
Prokaryotic defense system [BR:aty02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    A9R16_013300
SSDB
Motif
Pfam: Cas3-like_C_2 Cas3_I-F_Cas2 Cas3_HD DEAD
Other DBs
NCBI-ProteinID: UEN99386
LinkDB
Position
2804155..2807370
AA seq 1071 aa
MHVIFIANCEQAALARTRTLLDRYAPRIGDRAWGTLITRDALDEVYKALRRQASRNTSVA
CYRNDAVFGLRLIWIVGNRNHYDAQDRFAVATQERPKGFPMPFRHAALIARLAGYVHDFG
KASRRFQDKLEASCKGIQDPASQSDAIRHEWLSAWLMKHLMGPGHDTPIDAQTLTAAWNA
MFPKHRAGDSVPDSPSNANFLPMGCHLKTPQDALLWSVGTHHGGMGGILTQEDGLNGELH
IRTRNPLEIEGNLTLKRPDAFAVPGASQDAKRWAALFQVINKTAQRIQGLERSAPYWEGV
MLLARAALIFADQKVSSETFPETKDRSREAGILFANTKNCSQDALSVPSIRRKRGSTPKH
VRFMDQPLSWHLQEVGDRAADNIRMFTGEDLPVVDRDLVRTVLAARADDPGSRFVWQDQA
VDHVRAQPGGQLVFNVASTGAGKTLANLKMAFAVRPDAARLAVAFNLRSLTTQTFAAFQK
DLARLGVPSSTFARDFAVLMGEHGLDDREDANEDEEDVPTDDTYEPNREHSLEPPSWLTA
IAKGRSENDPSAQKLAKLIASPVLVSTMDWIVAAGEPGQQHRHAKALIRVAHSDLILDEV
DSYDVRATVAVMRVVQIAASFGRNVIVSSATLSPGLAKGLCLAYAQGRLVQDALFGTRPW
HLTLVSDKFAPHPLPSPDPEEADHFYRKTLHTLADRLTTEPVTKRYMIAPVDSLETFAPT
IAEQAAQLHEMQAAIPPGLSCRLSIGLVRLANVDRCMEVAEALRADGRFLVTAYHARDVL
QRRAWKEKRLDGILSRGDDRWVEVLCEACPEIRDTSGDVRLIVVATPVEEVGRDHDFDWA
VIEPSSMHSIIQTAGRVNRHRRLPLSDGQINVVLLSRNWHDLEGKHGKVFVQPGLETDDL
DGNSTHPSHDLTDLMRTTEGRLPDGVLDAGLIFGDGTRKTRFAEYDENAVSIQVQKAIAI
IGRKPGYETHFMIRGFAEGPAGYPLRDKDPQFRITIDLGTSQFFLTDKKKGSATQAQGAV
AVEDLPGSGIWLTPQWDKVEEPNKLLHASIRPGYGGNVPDTLRLTWHGMRT
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgcacgtcattttcatcgccaactgtgagcaggcagccctggcgcgcacgcggacccta
ctcgaccgctacgccccgcgcatcggcgatcgcgcctggggcacactcattacgcgcgac
gcattggatgaggtctacaaggccctgcgccgccaggcgagccgtaatacgtccgttgcc
tgctatcgcaatgacgcggtgtttgggctgcggttgatctggatcgtcggcaatcggaat
cattacgacgcccaggatcgtttcgcagtcgccacgcaagaacgccccaaggggtttcct
atgcccttccggcatgcggccctgatcgcacgtctggcgggctatgtccacgacttcggg
aaggccagtcgccgttttcaagacaagctggaagccagttgtaagggcatccaggaccca
gcctcccagagtgacgccatccgacatgagtggctctcggcgtggctcatgaagcatctt
atgggtccagggcatgacacccctatcgacgcgcagacccttaccgccgcctggaacgcg
atgttccccaagcaccgtgcgggcgacagcgtccctgatagcccgtctaatgcaaatttc
cttcccatggggtgtcacctgaaaactcctcaggacgcccttctgtggtccgtgggaacg
caccatgggggcatgggcgggattctcacgcaggaagacggactgaatggggagttgcat
atccggacacgcaatccgctcgaaatcgaaggcaacctgaccctaaaacggccagatgcc
tttgccgttccgggtgcgtcgcaggacgcaaaacggtgggccgcgctctttcaggtaatc
aataagactgcccagcgtatccagggtctcgagcgatcggccccgtattgggagggcgtt
atgctcctggcgcgcgccgcgctgatctttgccgaccagaaggtttccagtgaaaccttt
cctgaaaccaaagacaggtcgcgagaggcggggattctctttgcgaataccaaaaattgt
tcgcaggacgccctgtccgtgccatcaatccgcagaaaaagggggtccacgccaaaacac
gtccgattcatggaccaaccattgtcctggcacctgcaggaggtcggcgaccgcgcggcc
gacaatatccgcatgtttacgggcgaggacctgcccgtcgtggatcgggacctagtgcgc
acggttctggcggcacgggccgatgacccgggctcgcgttttgtttggcaggaccaggcc
gttgaccatgtgcgcgcccagccgggaggccaactggtcttcaatgtggcctcgacaggg
gccggtaagaccttggccaacctcaaaatggccttcgctgtgcgtccggacgccgcgcgg
ctggccgtcgccttcaatttgcgcagcctgaccacccagactttcgcggcgttccaaaaa
gaccttgcgcggctgggggtgcctagcagcacatttgctcgtgatttcgccgtcttgatg
ggggaacacggcctggacgatcgggaagacgccaacgaagacgaggaggatgtgcccaca
gatgacacctatgaaccgaaccgtgaacatagtcttgaaccgccttcctggcttaccgct
attgcgaaaggccgatccgagaacgatccgtccgcacaaaaattggccaagttgatcgcc
agtcccgtattggtctccacgatggactggatcgtcgccgctggcgaaccgggacaacag
catcgccacgccaaggccctgatccgcgtcgcccatagtgatctcatacttgatgaggtc
gactcctacgacgtgcgggccacggtggcggtcatgcgcgtcgtgcagatcgcggcgtcg
ttcgggcgcaatgtgatcgtctcgagtgccaccttgagtccgggactggccaagggactt
tgtctggcctatgcccaaggacggctcgtccaggacgcgcttttcggtacgcgcccctgg
cacctgaccctggtcagcgacaagttcgcaccccatcccttaccgtcaccagatccagaa
gaggcggatcacttttatcggaaaacattacacacactggccgatcgtctgaccacagag
cccgtcaccaaacgctacatgattgccccggtcgactccctggaaacctttgcgcccacc
atcgccgaacaggccgcgcaattgcacgaaatgcaggccgccataccgccgggcctctcg
tgtcggctatccattgggctcgtgcgcttggccaacgttgatcgttgtatggaggtcgcg
gaagccttgcgcgctgatgggcgttttctggtcacggcctaccatgcccgagatgtcctg
cagcgtcgggcctggaaggaaaagcgtctcgacggaatattatcgcgcggcgatgaccgt
tgggttgaggtcttatgtgaggcatgccccgagatccgggatacgtctggcgatgttcgc
ctgattgtggtggccacgccggttgaagaagtggggcgtgaccatgatttcgattgggct
gtcatcgagccgtcgagcatgcactcgatcatccagaccgcggggcgcgtcaaccgtcac
cgtcggcttcccttaagtgatgggcagatcaacgttgtgctgctgtcccggaattggcac
gatctggaagggaagcatggcaaggttttcgtgcagcccggtctcgagacggatgacttg
gatggtaacagcacgcatccttcacatgacctgaccgacctgatgcggacaaccgagggc
cgcctaccggatggggtcctggatgccggactgatttttggcgacggaacccggaagaca
cgttttgcggagtatgatgaaaacgccgtgtcgatacaggtccaaaaagccatcgccatc
attggccgtaaacccgggtacgagacacacttcatgatccgggggttcgctgaggggccc
gctgggtaccctttgcgagacaaggacccacagtttcgcatcactattgatctcggcacg
agtcaattctttcttaccgacaagaaaaaagggtctgccacccaggcccaaggagccgta
gctgtcgaggatctcccgggatccggaatatggttgacgccacaatgggataaggtagag
gaacccaataagctcctgcatgcgagtatcagaccgggctacggcggcaacgtacccgat
accctccgcttgacatggcatggaatgcggacctga

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