Acidiferrobacter thiooxydans: A9R16_013430
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Entry
A9R16_013430 CDS
T07877
Symbol
rlmH
Name
(GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
KO
K00783
23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:
2.1.1.177
]
Organism
aty
Acidiferrobacter thiooxydans
Brite
KEGG Orthology (KO) [BR:
aty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aty03009
]
A9R16_013430 (rlmH)
Enzymes [BR:
aty01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.177 23S rRNA (pseudouridine1915-N3)-methyltransferase
A9R16_013430 (rlmH)
Ribosome biogenesis [BR:
aty03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
A9R16_013430 (rlmH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOUT_MTase
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
UEN99411
LinkDB
All DBs
Position
complement(2832981..2833457)
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AA seq
158 aa
AA seq
DB search
MAMRVLAVGTRVPAWVQAGFADYARRLSGPYRLELTEITPARWTRANDRDRLKREEGERL
LGAAPRQALLVALDVEGRMRTSEALARDLETWLAAGRPLTFLVGGAEGLADACLEAAFDR
WSLSPLVFPHALVRVMLAEQLYRAYSALSGQPYHRGSS
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atggccatgcgtgtgctggcggtcggtacgcgggtccctgcctgggtgcaggccggattc
gcggactatgcccgtcgtttgtccggcccctaccgtctggagttgaccgagatcacgccg
gcgcgatggacgcgtgcaaacgaccgggataggctcaagcgcgaggagggcgagcggctc
ctgggcgccgcgccgcgccaggccctgcttgtggcactcgatgtcgaggggcgcatgcgc
acgagcgaggcgttggcccgcgacctcgagacgtggctggccgcgggccgtccactcacc
ttcctggttgggggcgcggagggactggcggatgcctgtctcgaggcggccttcgaccgc
tggtcgctgtcgccgctcgtgtttccacacgccctggtgcgggtcatgctggccgaacag
ctgtatcgggcctacagcgccttgagcgggcagccttaccatagggggtcgtcttga
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