KEGG   Acidiferrobacter thiooxydans: A9R16_015120
Entry
A9R16_015120      CDS       T07877                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
aty  Acidiferrobacter thiooxydans
Pathway
aty00061  Fatty acid biosynthesis
aty00071  Fatty acid degradation
aty01100  Metabolic pathways
aty01212  Fatty acid metabolism
aty02024  Quorum sensing
aty04146  Peroxisome
Module
aty_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:aty00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    A9R16_015120
   00071 Fatty acid degradation
    A9R16_015120
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    A9R16_015120
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    A9R16_015120
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:aty01004]
    A9R16_015120
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aty04147]
    A9R16_015120
Enzymes [BR:aty01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     A9R16_015120
Lipid biosynthesis proteins [BR:aty01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   A9R16_015120
Exosome [BR:aty04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   A9R16_015120
  Exosomal proteins of breast cancer cells
   A9R16_015120
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: UEN99728
LinkDB
Position
complement(3203021..3204721)
AA seq 566 aa
MSVATGRGPATLADLLTNRIAATGEEPAYRHYDGARWRAWNWYAAGREVARARAAFAASG
LRRGDRVGICAYNTPEWVFCDLAALSAGLVVVPLFFNDRPENIAYCLKDAGVRWLFVDRP
PAAEILDCGLQGIVSFKETRGVASFRDWLAAADGRQVAPADHGPGDLATIVYTSGTTGRP
KGVMLTHGNILANVGALLTALPEVAGETHRFLSFLPLSHMLERTVGEYVAIAMGAETVFS
RGITELGEDLKIARPTILVSVPKIFERTYGKMQEELKVSPRRQRLVAHASALGLAVYEGR
ARGPERLLARLSDALVGRAVRRRLGGKLRYVFLGGAPAAPRLLGFFTGLGLRFVQGYGLT
ETAPVISCNRLSDRDLASVGRPLANVTVRFVNDEICVKGPSVMSGYWNLPEATAQAMDAE
GYFHTGDLGRLEGGLLYLTGRAKDIIVLSNGEKVAPADVEQAILQDPAFEHALVVGEGRG
ALALLAVSDTADEQQLRDRANDQLHAFPGYTRIRHVLRVSGPWTIENGFLTPTLKVRRQW
IEERYAAAIDALYTAPRGDAEGRPAR
NT seq 1701 nt   +upstreamnt  +downstreamnt
atgagcgtcgccaccgggcgcggtccggcaacgctcgccgacctgttgaccaaccgtatc
gccgccaccggcgaagaacccgcctatcgccactacgacggcgcccgctggcgggcgtgg
aattggtacgctgccggccgcgaggtggcgcgcgcgcgcgcggcgtttgcggccagtgga
ctacgtcgcggggatcgggtagggatctgtgcctacaatacccccgagtgggtgttctgc
gatctcgcggccctctccgcgggtctcgtggtggtccctttgtttttcaatgatcgcccg
gaaaatatcgcctactgcctgaaggatgccggggtgcgctggctgtttgtggaccgccca
ccggccgccgagatcctagactgcgggctccagggtatcgtgagcttcaaggagacgcgt
ggcgtggcctcgtttcgcgactggctggcggccgccgatggccggcaggtggccccggcc
gatcatggtccgggcgatctcgcgaccatcgtctatacctccgggaccaccggccggccc
aaaggggtgatgctgacccacggcaatatcctcgccaatgtcggcgcattgctcacggcc
ctccccgaggtggccggggagacacaccgcttcctgtcgtttctgccgctgtcgcatatg
ctcgagcgcacggtcggggaatatgtggcgatcgccatgggtgccgagacggtgttctcg
cgtggcatcacggagctgggcgaggacctgaagatcgcgcgccccacgatccttgtgagc
gtgcccaagatcttcgagcgcacgtatggcaagatgcaggaggagctcaaggtctcgccg
cgtcgccagcgcctcgtggcgcacgcctccgcgctcgggctcgcggtctacgagggtcgc
gcgcgcggccctgagcgtctcctggcgcgattgagcgacgccttggtggggcgcgccgtg
cgccgccgtctgggtggtaagcttcgttacgtgttcctggggggcgcgccggccgcacca
cgcctgctcggctttttcacgggccttggcctgcggttcgtgcagggctacggcctcacc
gagaccgcccccgtgatcagctgcaaccggctctccgatcgggatctggcgtccgtgggc
cggccgctcgccaatgtcaccgtgcgcttcgtaaacgacgagatctgcgtcaagggcccg
agcgtgatgtccggatattggaacctcccggaggcgactgcccaggcgatggacgccgag
ggttatttccataccggagacctgggacggctcgagggcgggcttctgtatctcaccggg
cgcgccaaggacatcatcgtcctatcgaacggtgaaaaggtggcgccggccgacgtcgag
caggcgatcctgcaagaccccgcattcgagcatgccttggtggtgggcgagggccgtggc
gcactggcgctgttggcggtaagcgataccgccgacgagcagcagctccgggatcgcgcc
aatgaccagctgcatgcctttcccggatatacccgcatccgccatgtgttgcgcgtaagc
ggcccctggaccatcgaaaacggcttcctcacgccgaccctgaaggtccgccgccaatgg
atcgaggagcgctatgctgcggccatcgatgccctttacacggcgccgcgtggggacgcc
gaagggcgcccggcacgctag

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