KEGG   Acinetobacter tibetensis: M5E07_01940
Entry
M5E07_01940       CDS       T08883                                 
Symbol
rnr
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
atz  Acinetobacter tibetensis
Pathway
atz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:atz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    M5E07_01940 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atz03019]
    M5E07_01940 (rnr)
   03016 Transfer RNA biogenesis [BR:atz03016]
    M5E07_01940 (rnr)
Enzymes [BR:atz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     M5E07_01940 (rnr)
Messenger RNA biogenesis [BR:atz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     M5E07_01940 (rnr)
Transfer RNA biogenesis [BR:atz03016]
 Prokaryotic type
  tRNA degradation factors
   M5E07_01940 (rnr)
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 RNase_II_C_S1
Other DBs
NCBI-ProteinID: USE83635
UniProt: A0AAE9LSB4
LinkDB
Position
complement(400515..402950)
AA seq 811 aa
MMKNWVDPEAKAEAERYENPIPSRTLILETIEQLNSPQSHADLVEHFQIADQKSIDALSH
RLIAMVRDGQLMKDGFKFQRMADQPSYEATVYINSKGFGTASIAGHDDLFLPERELRQVF
NGDRVKVQQTSVDRKGKAWGFISEVLQRRVKQIIGKVSQHEGEYFIQPANPNAHQPITLE
KELIEHAKLKLGDSVRIAIDDYPTREEFATGHVIQSMADKADTEIIIPQTILEFGLPYEF
PEEVIKEAESFKEPTAKDREGRIDLRDLPLVTIDGEDARDFDDAVYAEKRSGGGYRVVVA
IADVSHYVRIGKPLDDEAQERGTSVYFPHFVLPMLPEALSNGLCSLNPHVDRLCMVCDLK
LSRAGRVTDFEFYPSVMHSKARLTYTQVAQYFDGDSAAVPEDREVRKSLNTLLQLYQVLK
DLRGKRHAMEFETVETYMTFDDLGGINEILPRTRNDAHKLIEECMLLANVAAAEFALEHD
IPMLYRVHEPPEFSRIQKVRDFVKLLGLKFSDQPTQADYQAVIEATKDRIDAPSIHAVLL
RSMMQAYYGAKNAGHYGLAYEAYTHFTSPIRRYPDLLLHRAIKAKLAGKPFPLSGAALDD
AGEHFSQTERRADEASRSVTMWLKCHYMQQHLGDEFVGVISAVAEFGLFVTLKDLYVDGM
VHVSKLGDDFFVFDQVSQSLVGQNRGQTFGLGDEVKIKVAAVNLEERKIDFELIQQLSHA
GRAIRSRAPRIAKTATVQVKEETFIPRAAKASTEARESGDQPVTKKKAKSNSYGKKADKK
ASSKTDAKNKDKAKKKNKVKKKKANAKVRSE
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgatgaaaaattgggtcgatcctgaagccaaagcggaagctgaacgctacgaaaatcct
attccgagccgtacgctcattttagaaaccatagaacaattaaactcgccacaatcgcat
gctgatttagtggaacatttccaaattgccgatcaaaagagcattgatgcgctaagtcac
cgccttatcgctatggtgcgtgatggtcaactgatgaaagatggttttaaatttcaacgt
atggccgatcaaccgagctatgaagctacggtctatatcaacagtaaaggctttggtaca
gccagtattgcaggtcatgatgatctatttttacctgaacgtgaactccgccaagtcttt
aatggtgatcgggttaaagtgcaacaaacttcggttgatcgcaaaggtaaagcgtggggc
tttatttctgaagttttgcaacgtcgcgtcaagcaaatcatcggaaaagtctcacaacat
gaaggtgaatactttattcaacctgccaatccgaatgcacatcaacccattacactagaa
aaagagttgattgagcacgcaaaactcaaactgggtgattcagtccgtattgcgattgac
gactatccaactcgtgaagaattcgcgacgggacacgtgatccagtccatggcggacaaa
gcggatactgaaatcattattccacaaaccattttagaatttggtttaccttacgagttt
ccagaagaagtcatcaaagaggccgaaagctttaaagaaccaacggccaaagaccgtgaa
ggtcgcatcgacctacgtgacttgcctttagtcaccattgatggtgaagatgctcgtgac
tttgatgatgccgtttatgccgaaaaacgttctggcggaggctatcgtgtagtcgtggcg
attgccgatgtcagtcattatgtgcgtattggcaaaccgctggatgatgaagcgcaagaa
cgtggcacgtcagtttattttccacattttgtgctgccaatgttacccgaagccctctcg
aatgggttatgttctttaaatccacatgtagaccgtttatgtatggtctgtgatttaaaa
ctttcccgtgcgggtcgcgtgacagactttgaattttacccttcagtcatgcattccaaa
gcacgtctgacctacacacaagttgcccaatattttgatggcgatagcgctgcggttcct
gaagaccgtgaagtacgtaaatcactgaatactttactccaactgtatcaagtccttaaa
gacttacgcggcaaacgtcatgccatggaatttgaaaccgtcgaaacctacatgaccttt
gacgatttgggcggcattaatgaaattctgccacgtacgcgtaacgatgcacataaactg
attgaagaatgtatgttgttggcgaacgtggctgcggctgagtttgctctcgagcatgat
attccaatgctgtaccgtgtgcatgaaccacctgagttctctcgcattcaaaaagtccgt
gattttgtcaaattattaggattgaaattctctgaccaacccactcaagctgattatcag
gcggttattgaagcgaccaaagatcgtatcgatgcaccaagtattcatgcagtgttgtta
cgctctatgatgcaagcgtattacggcgcaaaaaatgcaggacactatggtctggcttat
gaagcgtatacccacttcacttcgccaattcgccgctacccagatttactgctgcatcgt
gccattaaagcaaaattagccggaaaaccattcccactttcaggcgcagcactggatgat
gcaggtgaacatttctctcagactgaacgtcgtgcagatgaagcatctcgctctgtgacc
atgtggttaaaatgccactatatgcaacagcatctaggggatgaatttgtcggggtgatt
tccgctgtggcagaatttggtttgttcgtgaccctgaaagacctgtatgtcgatggtatg
gtgcatgtcagtaaactaggcgatgacttttttgtgtttgaccaagtcagccaaagtctg
gtgggacaaaaccgtgggcaaacttttggtttaggcgatgaagttaaaattaaagttgca
gcagtcaacttagaagaacgcaagattgattttgaactgattcaacaactgagccatgca
ggacgtgcgattcgtagccgtgctccacgtattgccaaaacagcaacagttcaggtaaaa
gaagaaacgttcatcccacgtgcagcgaaagcttcaacggaagcccgtgaatctggcgat
cagccagtcacgaagaagaaagccaagtctaattcttatggtaaaaaagccgataagaaa
gcatccagtaaaaccgatgctaaaaacaaagacaaagccaagaaaaaaaataaagtgaaa
aagaaaaaagccaacgcaaaagtgcgtagtgaataa

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