Acinetobacter tibetensis: M5E07_04405
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Entry
M5E07_04405 CDS
T08883
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
atz
Acinetobacter tibetensis
Pathway
atz03030
DNA replication
atz03430
Mismatch repair
atz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M5E07_04405 (dnaQ)
03430 Mismatch repair
M5E07_04405 (dnaQ)
03440 Homologous recombination
M5E07_04405 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atz03032
]
M5E07_04405 (dnaQ)
03400 DNA repair and recombination proteins [BR:
atz03400
]
M5E07_04405 (dnaQ)
Enzymes [BR:
atz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M5E07_04405 (dnaQ)
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
M5E07_04405 (dnaQ)
DNA replication proteins [BR:
atz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M5E07_04405 (dnaQ)
RNase H
M5E07_04405 (dnaQ)
DNA repair and recombination proteins [BR:
atz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M5E07_04405 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
USE84071
UniProt:
A0AAE9LT32
LinkDB
All DBs
Position
complement(923682..925052)
Genome browser
AA seq
456 aa
AA seq
DB search
MSETITLYVDGACRGNGKDSALGGWGAYIVTATEERKIFGGETQTTNNRMELTAAIEGVL
ACPKSAKLIIWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWQKLDSVCQGREIEWNWIK
GHSGHAGNEMADQLANLGADQTAKNLTAVLENNTEDKKKAESDWLFDDPFGLDFAGEEAE
PVEPECVEDEVSESTIPMEMLQDSQKQTTTMHPHIVITPSTVEAIGPRQLILDTETTGFY
FQDSDRIIEVGAIEMINRKLTGSSIHIYINPEKEVGDSVNVHGITDEFLTDKPKYAEIAD
VLFDYLKGAEIIAHNATFDMNFLNMEFKRTGHGALSEVCEVTDTLAMAKSKHPGQKNSLD
ALVRRYEIAQRDRTFHGALLDAEILADVYLAMTGGQVSFDIDALSQSEQQQGTSGRRQVD
ETGLAVILPSEEELAAHETWVKQIEEKQGKSCFFSK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaacaattacgctctatgtcgatggcgcttgtcgcggaaatggtaaagatagt
gcactcggaggttggggagcttatattgttacagcgaccgaagaacgtaaaatctttggc
ggcgaaactcaaaccaccaataaccgcatggagttaaccgcagcaattgaaggcgtactc
gcttgtcccaaatctgccaagttaattatctggacagactccaactatgtcaaacaaggc
attaccgaatggattcatggttggaaaaagaaaaactggaaagatgttaagaatcccgat
ttatggcaaaagttggatagtgtctgccaaggtcgagaaattgaatggaactggatcaaa
ggtcattcaggtcacgcgggcaacgaaatggcagatcaattagcgaatttaggcgctgac
caaaccgcaaaaaatttaacagcagtactagaaaacaacacggaagataaaaaaaaagct
gaatccgactggctttttgacgaccctttcggactagattttgcaggagaagaagctgag
cctgtggaacctgaatgtgttgaagatgaagtctctgaatccaccattcctatggaaatg
cttcaagattcacaaaaacaaacgactacgatgcatccgcatattgtgattacgccttca
accgttgaagccattggtcctcgtcagttaattctggataccgaaaccacaggtttctat
tttcaggacagcgatcgcattattgaagtcggtgcgattgaaatgatcaatcgtaaactc
acaggcagctccatccatatttatatcaatcctgaaaaggaagtcggtgactcggtcaat
gtccacggcattaccgatgagtttttaacagacaaacccaaatatgcagaaattgcagac
gtcttgtttgactacttaaaaggcgcagagattattgcgcataacgcgaccttcgatatg
aacttcttaaatatggagtttaagcgtacaggtcatggtgcactctctgaagtctgcgaa
gtcactgatactttagcgatggcaaaaagcaaacatcctggacaaaagaactccttggat
gccttggtacgacgctacgaaatcgcacaacgcgaccgtactttccatggtgcattgctc
gatgctgaaattttagccgacgtctatttggcaatgacgggcggacaagtgtcatttgat
atcgatgcgctatcgcaaagtgaacaacaacaaggcacaagtggacgacgccaagttgat
gaaacgggcttagccgtcatcttaccttccgaagaagaattggccgcacatgagacttgg
gtcaaacaaattgaggaaaaacagggcaaatcttgctttttttcaaaataa
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