Acinetobacter tibetensis: M5E07_10810
Help
Entry
M5E07_10810 CDS
T08883
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
atz
Acinetobacter tibetensis
Brite
KEGG Orthology (KO) [BR:
atz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atz03019
]
M5E07_10810 (hrpA)
Enzymes [BR:
atz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
M5E07_10810 (hrpA)
Messenger RNA biogenesis [BR:
atz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
M5E07_10810 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
T2SSE
nSTAND3
NACHT
AAA_30
PhoH
TsaE
Myosin_head
SLFN-g3_helicase
SRP54
ABC_tran
ROK
Motif
Other DBs
NCBI-ProteinID:
USE84854
UniProt:
A0AAE9LU47
LinkDB
All DBs
Position
complement(2205865..2209788)
Genome browser
AA seq
1307 aa
AA seq
DB search
MQSHLNIDQWVMARDRHRLNRLRRSKDGDPQQYQELFEQSNLKVRARFARLPQIKLNQDL
PVTQSAEQLMAAIQQHQVIIVAGETGSGKTTQLPQIAMLAGRGLTGMIGHTQPRRLAARS
VSQRIAEEVGEKLGESISFKVRFNEQGSQDSIVRLMTDGILLAELSHDRYLSKYDTIIID
EAHERSLNIDFIMGYLKQLLPKRPDLKVIVTSATLDVQRFSQYFHGAPIFEVEGRSFPVE
VRYRPISELSIGGSDDDEFDDFEENLPRAVVQAVEECFQDAQEKGHPEHADILIFASTEQ
EIRELQETLQKYGPRHTEILPLYARLALADQQKIFNSSGGGRRIIIATNVAETALTVPNI
HYVIDSGFARISRYNYRSRVQRLPIEAISQAAANQRKGRCGRIAPGVCIRLYSEEDFLSR
PEFTEPEIKRTNLASVILQMQSLSLGSLEAFDFIEPPDHRLVNDGRKLLVELGAMTEKNP
SKSSLDKGGLENAPLSKRGVGGDSLTKVGQMMAKMPIDPRLARMIIGGAHFGVLNEVLII
VAALAVQDPRERPADKQMQADQKHALFREADSDFLFYLKLWEAIHDPAESMSENKRRTFA
HQHFLSWLRLREWKKTHEQLLDLAKGLNLSFNDKKASYENLHRALLTGLLSFIANKTDER
NVFMAVRQQKARVFPASTLHKSNTPWIMAFEMVETSQVYLRTLAKIEPEWILLAARDLLK
YHYFEPHWSKKAGIVNAYAQISLFGLIIEPKRMINYEKVDHLAAHEIFLRDALTTGNLGI
LPPFLKHNLLKLEEVERVEDKLRRRDLVVDEETIYQFYAAKVPVEIASRRSFEDWRATIE
PTQPRFLYVEDDSLWLNDRPTTQQFPDYLHNGELRLAASYRFDPSHDEDGATVKIPVQAL
PQVDENIWSWGIPGWRQDLIEALLKALPKDKRRNLVPIPDTAKKLMQRIDAVHLREHLFS
FLAFQLRGEQITEKDFSFERIDQYLLPFIKVIDEKGRVIEKGRNLAELKARCRTETHSPV
KQAKGQFQTFPEDFVFEASHKVTGVVVKQYQALVPVKVFANLDAKDNSGVVIQTFNDQNE
AIKQHREGIIHLMHLQLGDLVRQLKKQISKPMALAYSPLGDKAQLEQMLVYATLQLAITD
LPINQAEFQQLLLTVKQNFLTHGQQALKIMSDIFIQWQNIRQKLLMLDADIFGRSMDDIE
DQLDLMQLANFVYSKPVDVWTEYPRYLAALLLRLDRLPNNLQRDVAAIGQIDPWMDKLFQ
YKNDVRLKELYFMIEELRISLFSQPMKTKMPISATRLQKLWERLSIG
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaagtcatttaaatatcgatcaatgggttatggcccgcgaccgtcatcgtttaaat
cgactacgccgtagcaaagatggtgatccacagcaatatcaggaactgtttgaacagtcc
aatcttaaagtgcgtgcgcgttttgcccgtctgcctcaaattaaactgaatcaagacctg
cctgttacgcagtcggctgaacaattgatggctgcgattcagcagcaccaagtcattatt
gtggcaggtgaaacaggttctggtaaaaccacacagttaccccaaattgccatgttagca
gggcgtggcttaacaggcatgattggccatactcagccacgtcgtttggccgcacgtagc
gtttcacagcgtattgctgaagaagtgggcgaaaaactcggagaatccatcagcttcaaa
gttcgttttaatgaacagggttcgcaagactcgattgtgcgcttaatgacagatggtatt
ttgctggcggagctttctcatgaccgttatttaagtaaatacgatacgatcattattgat
gaagcgcatgaacgctcgttgaatattgattttattatgggttatttgaagcaattattg
ccaaaacgccctgatttaaaagtcattgtgacttccgcaactttagatgtacaacgcttt
agccaatattttcatggcgcgcccatttttgaagtggaaggccgaagttttcccgttgaa
gtacgttatcgtccaatttccgagttaagcatcggtgggagtgatgatgatgaatttgat
gattttgaagagaatctgccacgtgcggtagtacaagcggtagaagaatgttttcaagat
gcacaggaaaaaggtcatcctgaacatgctgatattctaatttttgccagtaccgagcag
gaaattcgagaattacaagaaaccttgcagaaatatggtccacgtcatactgaaatttta
ccgctttatgcgcggttggctttggcagatcaacaaaagatttttaattcttcaggtggt
ggtcgacgcattattattgcgaccaacgttgccgaaaccgctttgactgtaccgaatatt
cactatgtgattgatagtggttttgcccgtatttcacgctataactatcgttcacgtgtg
caacgtttacccattgaagcaatttctcaagcagcagctaatcaacgtaaagggcgttgt
ggacgtatcgcaccgggtgtgtgtattcgtttatacagtgaagaagattttttaagtcgt
cctgaatttactgaacctgaaattaaacgtaccaatttggcttctgttattttgcaaatg
caaagtctgagtttaggttcgctcgaagccttcgattttattgaaccgccagatcacagg
cttgtgaatgatggtcgtaaactcttggttgaactgggtgcaatgactgagaaaaatcct
tctaagtcctctttggataaaggagggcttgaaaatgcccctctttctaaaagaggggtt
gggggagattcattgaccaaagtcgggcagatgatggcaaaaatgccaattgatccacga
ctagcccgtatgattataggcggtgcccattttggcgttttaaatgaagtgttgattatt
gtggcggctttggcggtacaagatcctcgtgagcgccctgcggataagcaaatgcaggca
gatcaaaaacatgccttgttccgtgaagccgattcagacttcctgttttatttgaagttg
tgggaagcgatacatgatcctgctgagtccatgagtgagaacaagcgtcgtactttcgca
catcaacattttttaagttggttgcgcctacgtgagtggaagaaaacgcatgaacaattg
ttggatctggccaaaggcttaaacctttcctttaatgataaaaaagccagttatgaaaac
ttacatcgtgctttattaacaggtttattgtcgtttattgccaataaaaccgatgaacgt
aatgtctttatggcagtccgccaacagaaagcacgtgtatttccggcttcaactttacat
aagagcaatacgccgtggattatggcgtttgaaatggtggaaacctcacaggtttatttg
cgtaccttagccaaaattgaacctgaatggattcttttggctgctcgtgatttattgaaa
taccattattttgaaccgcattggtcgaagaaagcgggcattgtgaatgcttatgcgcag
atttcattgtttggtttgattattgagccaaaacgaatgatcaattatgaaaaggttgat
catcttgcggcgcatgaaatttttcttagagatgctttgacgacaggtaatctgggcata
cttccgccatttttaaaacataatttattaaaattggaagaggtagagcgggtcgaagac
aaattgcgtcgacgtgatttggtcgtagatgaagaaacgatttatcagttctatgcagca
aaagtacctgttgaaattgccagtcgtcgtagttttgaagattggcgtgccaccattgag
cccacacaacctcgtttcttgtatgtagaagatgattcattgtggctgaatgatcgtcca
accacacaacagttccccgattatttgcataatggtgagttgcgtttagccgcgagttat
cgttttgatccaagccatgatgaagatggggctacggttaaaatacctgtgcaggcttta
ccacaagtggatgaaaacatttggtcttggggaattccaggttggcgacaggacttaatt
gaagccttattaaaagcgttgccaaaagataaacgtcgtaatttagtcccgattcctgat
actgcaaaaaaattaatgcagcgtatagatgcggtacacctacgtgagcatttatttagc
ttcttggcatttcaactccgtggcgagcagattaccgaaaaagatttttcttttgaaaga
atagatcaatatttgctgccttttattaaagtaattgatgaaaaagggcgtgtgattgag
aaggggcgtaatttagctgaattaaaagcacgctgccgtactgaaacccatagccccgtc
aagcaagccaaaggacaattccaaactttcccagaagattttgtgtttgaagcttcgcat
aaagtcacaggggttgtggtcaaacaatatcaagcactggttcctgttaaagtttttgca
aatttagatgctaaagataattcaggcgttgtgatacagacctttaatgatcagaatgaa
gcgattaagcagcatcgtgaggggattattcatctgatgcatttacaattgggggatttg
gttcgtcaattgaaaaagcaaatttccaagccgatggcattggcatattcgccattgggg
gacaaagcacagttagaacagatgctggtctatgcaacgctgcaattggcgattactgat
ctgccaattaatcaagctgaatttcagcaattactcttaacggttaagcaaaacttttta
acgcatggtcaacaggcgttaaaaataatgagtgatatttttattcagtggcagaacata
cgtcagaaattattaatgctagatgctgatatttttggccgtagtatggatgatattgaa
gatcagttagacctaatgcagttggcgaattttgtctatagcaaacctgtagatgtgtgg
actgagtatccacgttatttagccgctttgctattgcgtttggatcgtttgcccaataat
ctacagcgagatgttgctgccattgggcagattgatccgtggatggataaattatttcaa
tataaaaatgacgttcgtttgaaagaattgtatttcatgatcgaagagttgcgtatttcg
ctgttttctcaaccgatgaaaaccaagatgcctatttctgcgacacggctacaaaagcta
tgggaacgtcttagtatcggttaa
DBGET
integrated database retrieval system
