Aureimonas sp. AU20: M673_11665
Help
Entry
M673_11665 CDS
T04161
Name
(GenBank) hypothetical protein
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
aua
Aureimonas sp. AU20
Pathway
aua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M673_11665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aua03019
]
M673_11665
03016 Transfer RNA biogenesis [BR:
aua03016
]
M673_11665
Enzymes [BR:
aua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
M673_11665
Messenger RNA biogenesis [BR:
aua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M673_11665
Transfer RNA biogenesis [BR:
aua03016
]
Prokaryotic type
tRNA degradation factors
M673_11665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
S1
OB_RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ALN73378
LinkDB
All DBs
Position
2566772..2569072
Genome browser
AA seq
766 aa
AA seq
DB search
MAKRAIPTTDERSLSREAVLRFIADHPDRATKRDLAKAFGVKGEARVALKDIIADLQADG
LLAGGRKQYTRPGAPPTVTVLEIRDRDDEGGLLADPVGWDESDLGPRPRFTVRQKRDQAA
IAGIGDRILAQLDFDAPEGPAADVIRLLDRKTARPLGVFRETAGGGGRVEPVERRQHEFV
VGPGDTRGAKDGDLVEVEPSQRMRAGLPMGSIAEVIGSLHTEKAISTIALHAHSIPHVFP
KSVLAEADAAGPATMAHREDWRDLPLVTIDPRDAKDHDDAVHAAIDSDPSNPDGFVVTVA
IADVSWYVRPHSKLDAEAKLRGNSVYFPDRVVPMLPERISNDLCSLREGVDRPALAVRMI
FDRDGDKRSHRFHRIMMRSHAKIAYQDAQGAIDGTEKLVDPQIVASVLRPLWDAYAALKH
ARDRRAPLDLDLPERKIVLDAAGRVDRVILPERLDAHKLIEEFMIQANVAAAEALEQQKQ
ALIYRVHDSPSLARLETLRDFLRTLDLPLAKTGALRPANFNGILHAVKDTEHESLVNEVV
LRSQSQAVYTPENLGHFGLNLMRYAHFTSPIRRYADLIVHRALVKALGLGDGGLSREDEE
HLEETAEAISQAERRAMAAERDTVDRLIAHHLADRLGEEFEGKIQGVTKSGLFVQLPTFG
ADGFIPISTLGADYYHYDEVGHSLVGERSKRGFRLGDSVEVKLVEAVPLAGSMRFEMLSE
PRELPATTGSFHKAARRGHRLHRPGRTPKPAGKGPKAAAGKGRGKR
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgagcgatcccgaccaccgacgaacgctcgctgagccgggaggcggtcctg
cgcttcatcgcggaccacccggaccgcgccaccaagcgcgatctggcaaaggccttcggg
gtcaagggcgaggcacgggtcgcgctcaaggacatcatcgccgatctccaggccgacggc
ctcctggctggcggtcgcaagcaatacacccgccccggcgcgccgccgaccgtcacggtt
ctcgaaatccgcgaccgcgacgacgaaggcggccttctggccgacccggttggctgggac
gagagcgatctcggtccccgtccccgcttcaccgtgcgccagaagcgcgaccaggccgcc
atcgccgggatcggagatcgcatcctggcgcagctcgacttcgacgcgccggaaggtccg
gcggccgacgtcattcgcctgctcgatcgcaagactgctcggccgcttggcgtcttccgc
gagacggctggcggcggcggcagggtggagcctgtcgagcggcgccagcacgaattcgtc
gtcggccccggcgacacgcgaggcgccaaggatggcgatctcgttgaggtcgagccgtcg
cagcgcatgcgcgccggcctgccgatgggatcgattgccgaagtgatcggctcgcttcac
accgaaaaggcgatctccaccatcgcgctgcacgcgcattcgattccgcatgtcttcccg
aaatcggttctggcggaggccgacgcggccggtccggcgaccatggcgcatcgcgaggac
tggcgcgatctgccgctggtcacaatcgacccgcgcgacgccaaggatcacgacgacgcg
gtccacgccgctatcgacagcgatccgtccaatcccgacgggttcgtggtgacggtcgcg
atcgccgacgtctcttggtacgtccggccgcattcgaagctcgacgcggaggccaagctg
cgcggcaactcggtctatttcccagaccgcgtcgtcccgatgctgcccgagcggatttca
aatgatctttgttcgctgcgcgaaggcgtcgaccgaccggcgctggccgtgcgcatgatc
ttcgaccgcgacggcgacaagcgctcgcatcgcttccatcgcatcatgatgcgcagccat
gccaagatcgcctatcaggacgcccagggagcgatcgacgggacggaaaagctggtcgat
ccgcagatcgtcgccagcgtcctccgcccgctttgggacgcctatgccgcgttgaagcac
gcgcgcgaccggcgcgcgccgctcgatctcgacctgcccgagcgcaagatcgtgctcgat
gcggccggccgggtcgatcgcgtcatccttcccgaacggctcgacgcgcacaagctgatc
gaagagttcatgatccaggccaacgtcgccgcggcagaggcgttggagcagcagaaacag
gcgctgatctaccgcgtccacgattcgccctcgctcgcgaggctggaaacgctgcgcgac
ttcctgcgcacgctggatttaccgctcgcgaagaccggtgccctgcggcctgccaatttc
aacggcattctccacgccgtgaaggacaccgagcacgagagcctggtgaacgaggtcgtt
ctgcgctcgcagagccaggccgtctacacacccgagaatctcggccatttcggcctcaat
ctcatgcgctacgcgcatttcacctcgccgatccgccgctacgccgatctcatcgtccac
cgcgctctggtgaaggcgttgggtctcggtgatggcggcttgagccgcgaggacgaggag
catctggaagagaccgccgaggcgatcagtcaggcggagcgccgcgccatggcggccgag
cgcgacacggtggaccgccttatcgctcatcacctcgccgaccggctgggcgaggagttc
gagggtaagattcagggcgtcaccaagtcgggcctgttcgtccagttgccgacattcggc
gccgacggtttcattccgatctcgactttgggcgccgactactaccactatgacgaagtc
ggccattccctcgtcggcgagcgttcgaagcgtggctttcggctgggcgattcggtcgag
gtgaagctggtggaagccgtgccgctggccggctcgatgcgattcgagatgctgtccgaa
ccacgggagctgccggccacgaccggctcgttccacaaggcggcgcggcgcggccaccgt
ctccatcggcccgggcgcacgccaaagcccgccggcaagggcccgaaggcggccgctggg
aaaggacggggaaagcgatga
DBGET
integrated database retrieval system
