Aureimonas sp. AU20: M673_14945
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Entry
M673_14945 CDS
T04161
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aua
Aureimonas sp. AU20
Pathway
aua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M673_14945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aua03019
]
M673_14945
03400 DNA repair and recombination proteins [BR:
aua03400
]
M673_14945
Enzymes [BR:
aua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M673_14945
Messenger RNA biogenesis [BR:
aua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M673_14945
DNA repair and recombination proteins [BR:
aua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M673_14945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALN74021
UniProt:
A0A0S2ERS6
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All DBs
Position
3210052..3211929
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AA seq
625 aa
AA seq
DB search
MPDTGRAPARSSATAALFSGESDRPKPLDVLKTVFGHASFRGQQEAVVEQIVAGGDALVL
FPTGAGKSLCYQVPALCRRGTGIVVSPLIALMRDQVEALRQVGVRAASLNSAMSEDERSD
VWRELTAGRIDLLYVTPERLTSEGFRRSLARLDIALFAIDEAHCVSQWGHDFRPEYRELA
SLADEFPNVPRVALTATADAATRADIAERLRLEEAPVFATSFDRPNIRYAIVERDNARKQ
LLQFLQGHKGNSGIVYCLSRRKVEETAEWLNAQGIYALPYHAGMDSGVKAKNQDAFLREE
NLCLVATVAFGMGIDKPDVRFVAHLDLPSSVEAYYQETGRAGRDGQPAEAWMAYGLQDVV
QRRRMIDEGGSEDAIKRVERGKLDALLGICETPDCRRAAILRHFGESYDGRCGNCDTCLS
PVETWDGTDAAVKLMAAVYRTGERFGLAYVIDVLTGKANDKVRQNGHDTIAVFGQGRDLE
ARAWNSVARQLTAASLLLVDHQSFGALYLGEGARAVFKGERRVVLRKDRTRKATEFRRSA
PVTEGLSQESAFLFEALRKLRSRLSREQSLPAYMVFSDATLRAMAELRPGTLRLMGKVPG
VGAAKLERYGEMFLATLREAQEEMP
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcctgataccggacgcgccccggcgcgatccagcgccaccgccgctctcttctccgga
gaaagcgaccgccccaagcccctcgacgttctgaagaccgtgttcggccacgcgagcttt
cggggccagcaggaagccgtggtcgagcagatcgtcgcgggcggcgatgcgctggttctg
tttccgacgggcgccggcaagtcgctctgctatcaggttcccgcgctctgccggcgcggc
accggcatcgtcgtctcgcctctgatcgcgctgatgcgcgatcaggtggaggcgctgcgc
caggtcggcgtgcgcgcggcatcgctgaactcggccatgagcgaggacgagcgaagcgat
gtctggcgcgaactgacggcggggcggatcgatcttctctatgtcacgccggagcggctg
acgtcggaagggttccgccgcagcctcgcccggctcgacatcgcccttttcgccatcgac
gaagcacactgcgtcagccagtggggccacgacttccggccggaataccgcgagttggcg
agcttggccgacgagttccccaacgtgccgcgcgtcgcgctcacggcaacggcggacgcg
gcaacgcgggccgacatcgcagagcggctgcgcctggaagaagcaccggtcttcgccacg
tccttcgaccggccgaacatccgatacgccatcgtcgagcgcgacaacgcccgcaagcag
cttctccagttccttcaggggcacaagggaaacagtggcatcgtctattgcctgtcccgc
cgcaaggtggaggagacggcggaatggctgaacgcgcagggcatctatgccctgccctac
catgccggcatggattcaggggtcaaggccaagaatcaggacgctttcctgcgcgaggag
aatctctgcctcgtggcgacggtcgccttcggcatgggcatcgataagcccgacgtgcgc
ttcgtcgcccatctcgacctgccctcctccgtcgaggcctattaccaggagaccggccgc
gccggacgcgacggccagccggccgaggcctggatggcttacgggttgcaggacgtggtg
caacgacgccggatgatcgacgagggcgggtcggaagacgcgatcaagcgcgtcgagcgc
ggcaagctcgacgcccttctcggcatctgcgagacgccggactgccggcgcgccgcgatc
ctgcgccatttcggcgagagctatgacgggcgctgcggcaattgcgacacctgcctttcg
ccggtcgagacctgggacgggaccgacgcggccgtgaagctcatggcggcggtttatcgc
accggcgagcgcttcggcctcgcctatgtcatcgacgtgctcaccggcaaagccaacgac
aaggtgcgccagaacgggcacgatacgatcgccgttttcggccaggggcgcgatctcgaa
gccagggcgtggaactcggtggcgcgccagttgaccgccgcgagcctgcttctggtggat
catcaatccttcggcgcgctctatctcggcgagggcgcgcgcgccgtgttcaagggcgag
cggcgcgtcgttctgcgcaaggaccgcacccgcaaggcgaccgagttccgccgctccgcg
ccggtcacggaggggctaagccaggaaagcgccttcctgttcgaggcgctgcgcaaactg
cgctcgcgcctgtcacgcgagcagagcctgccggcctacatggtgttttccgacgcgacc
ctgcgcgccatggccgagcttcggccgggcacgctgcgcctgatgggaaaggtgccgggc
gtcggcgccgccaagctggagcgctacggcgagatgttccttgctaccctgcgcgaggcg
caggaggaaatgccttag
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