Aureimonas sp. AU20: M673_15745
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Entry
M673_15745 CDS
T04161
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aua
Aureimonas sp. AU20
Pathway
aua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M673_15745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aua03019
]
M673_15745
Enzymes [BR:
aua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M673_15745
Messenger RNA biogenesis [BR:
aua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M673_15745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
ALN74181
LinkDB
All DBs
Position
3374755..3376161
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AA seq
468 aa
AA seq
DB search
MTQTNFQALGLADALLSALAAMDFTVPTPIQAQAIPAVLKNRDVLGIAQTGTGKTAAFSL
PIIDALLRQGARPKSGSAKVLVLAPTRELAIQIAENVKGFTAGTPIRHMTVFGGVSIRPQ
MEAARRGVDIVIATPGRLLDLIDQRGLTLSDISHVVFDEADRMLDMGFIRDITRIVKMLP
SDRQSLLFSATMPDNIASLAAKLLKNPVRVEVTPEVVTVEKIEQSVFLVPQKMKKHWLIK
HLPGFDKAVIFTRTKHGANRLSEDLEKAGIGALAIHGNKSQGARQRALSEFHAGKLKVLV
ATDIVARGIHVDDISHVVNFDLPEEPESYVHRIGRTARAGKSGIAVTLCDPSERSKLRQV
EKLTGLRFDVQSNEFSDASGAPDEPRGERGPRPQRSGRPGGGRSEAGRGGGGGRGGQSGE
RRPHGEHQRGAQRSENAAPRGDERDGQPNRNRTRRRSPRPQGGTRVAG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
ttgacccagacgaacttccaggcgctcggccttgccgacgcgcttctgtccgcccttgcg
gcgatggacttcaccgtgcccacgccgatccaggcgcaggccattcccgccgttctgaag
aatcgcgacgttctcggcatcgcgcagaccggcaccggcaagaccgccgccttctcgctt
cccatcatcgacgcgctgctgcgccagggcgcccggccgaagtccggctccgccaaggtt
ctcgtgctcgccccgacgcgtgagctcgcgatccagatcgccgagaacgtgaagggcttc
acggccggcacaccgatccgccacatgaccgtcttcggcggcgtttccatccgtccgcag
atggaagcggcccgtcgcggcgtcgacatcgtgatcgcgacccccggtcgccttctcgac
ctgatcgaccagcgcggcctgaccctgtccgacatcagccacgtcgtgttcgacgaggcg
gaccggatgctcgacatgggcttcatccgcgacataacccgcatcgtgaagatgctgccc
tccgaccgacagtcgctcctgttctcggccaccatgccggacaacatcgcctcgctggcc
gccaagctcctgaagaacccggttcgcgtcgaagtgacgccggaagtcgtgacggtcgag
aagatcgagcagagcgtcttcctggtgccgcagaagatgaagaagcactggctgatcaag
catctgccgggcttcgacaaggcggtgatcttcacccgcaccaagcatggcgccaaccgc
ctgtcggaagacctggaaaaggccggtatcggcgcgctggcgatccatggcaacaagagc
cagggcgcgcgtcagcgggcactgtccgagttccatgccggcaagctgaaggttctcgtc
gccaccgacatcgtggcgcgcggcatccatgtcgatgacatcagccatgtcgtgaatttc
gacctgccggaagagccggaaagctatgtgcaccgcatcggccgcacggcccgcgccggc
aagtccggcatcgcggtcaccctgtgcgatccgtccgagcgctccaagctgcgccaggtc
gagaagctgacgggccttcgcttcgacgtgcagtcgaacgagttctccgacgcctccggc
gccccggacgagccgcgcggcgagcgcggcccccggccgcagcgctccggccgccccggc
ggcggacgcagcgaagccggtcgtggcggcggtggtggtcgcggcggccagtccggcgag
cgccgtccgcatggtgagcatcagcgcggcgctcagcgcagcgagaatgccgcgccgcgt
ggcgacgagcgcgacggccagccgaaccgcaaccgcacccgtcggcgcagcccgcgcccg
cagggcgggactcgcgtcgccggctga
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