KEGG   Aurantimonas sp. HBX-1: LXB15_03480
Entry
LXB15_03480       CDS       T07802                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
aub  Aurantimonas sp. HBX-1
Brite
KEGG Orthology (KO) [BR:aub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aub03400]
    LXB15_03480
Enzymes [BR:aub01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LXB15_03480
    5.6.2.6  RNA 3'-5' helicase
     LXB15_03480
DNA repair and recombination proteins [BR:aub03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LXB15_03480
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 AAA_25 PSD4
Other DBs
NCBI-ProteinID: UIJ72728
LinkDB
Position
complement(757267..759786)
AA seq 839 aa
MTARPAPLAPSGPLPERFHAWFAGHGWAPRPHQLDLLQRAEAGGSVLLIAPTGAGKTLAG
FLPSLVDLDRRGRPKPGTRPRGVHTLYVSPLKALATDIARNLEKPVAEIGLKLTMETRTG
DTSQVRRQRQKLKPPDILLTTPEQLALLIAGKDARQFFSDLRYVIFDELHSLVTSKRGHL
LSLGLARLRALQPEIQTIGLSATVAEPDDLRQWLVPQGRNASPLSDLITVSGGARPDISI
LTSQERVPWRGHTALYAMPEIYAAIKAHKTTLLFVNTRWQAELLFQELWRINEETLPIAL
HHGSLDVARRRKVEAAMADNRLRAVVATSTLDLGIDWGDVDLVVHVGAPKGASRLAQRIG
RSNHRMDEPSKAILVPANRFEVMECQAALDANYLGAQDTPPLRDGALDVLAQHVLGMAVA
EPFRADDLFAEVISAAPYRDLDRETFDRVIDFVATGGYALRVYERYAKIRLTEDGTWRIA
HPRIAQQYRMNAGTILEAPMLQVRLIRGRSKSAIARGGPILGKIEEGFVEALSPGDTFTF
AGRVLRFETLFENQCLVSKAVDEDPKIPAYAGGKFPLTTYLAAQVRAMLADPARWQALPE
QVSHWLEIQQRKSLIPGPGELLVETFPNGRMHHMVLYPFEGRLAHQTLGMLLTRRLEKAR
AKPLGFVATDYAISIWGRGPMGAMIADGRLSLDDLFDEDMLGDDLEEWMADSWLLKRTFR
QCAVISGLIEKRHPGQEKTGRQVTVSADLIYDVLRSHEPDHILMRATWADAATGLLDVAR
VADLLGRIKHHIVHKDLDQVSPLAVPVMLEIGRERVVGEARDELLAQAAEDAMIAAALE
NT seq 2520 nt   +upstreamnt  +downstreamnt
gtgaccgctcgccccgccccccttgcgccgtcaggccccctgcccgaacgcttccatgcc
tggttcgcaggccatggctgggcgccgcgcccgcatcagctggatctgctgcagcgggcg
gaagccggcggctcggtgctgctgatcgccccgaccggcgccggcaagacgctggccggc
ttcctgccgtcgctggtcgatctcgaccgccgcggccggccgaagcccggcacgcggccg
cgcggcgtccacacgctctacgtctcgccgctgaaggcgctggcgaccgacatcgcccgg
aacctcgagaagccggtcgccgagatcgggctgaagctcaccatggagacgcgtaccggc
gacacctcgcaggttcgccgtcagcgccagaagctcaaacccccggacatcctgctgacg
acgcccgaacagctggcgctgctgatcgccggcaaggacgcgcggcagttcttctccgac
ctcagatacgtgatcttcgacgagctgcattcgctggtgacgtcgaagcgcggccatctc
ctgtcgctgggtctcgcccggctgcgcgcgctgcagccggagatccagacgatcggcctg
tcggcgacggtggccgagcccgacgatttgcggcaatggctggtgccgcaggggcgcaac
gcctcgccgctgtcggacctgatcaccgtttccggcggcgcgaggcccgatatcagcatc
ctgacgtcgcaggagcgggtgccgtggcgcggccacaccgcgctctacgcgatgccggag
atctatgcggcgatcaaggcgcacaagacgacgctgctgttcgtcaacacgcgctggcag
gcggaactcctgttccaggagctgtggcggatcaacgaggagacgctgccgatcgcgctg
caccacggctcgctggacgtcgcccggcgccgcaaggtggaggcggcgatggccgacaac
cggctgcgcgccgtcgtcgccacctcgacgctcgatctcggcatcgactggggcgacgtc
gacctcgtcgtgcatgtgggcgcgccgaagggcgcctcgcgcctcgcccagcgcatcggc
cgctcgaaccaccggatggacgagccctccaaggcgatcctggtgcccgccaaccgcttc
gaggtgatggagtgccaggcggcgctcgatgcgaactatctgggcgcccaggacacgccg
ccgctgcgcgacggggcgttggacgtgctcgcccagcatgtcctcggcatggcggtcgcc
gagccgttccgcgccgacgatctctttgccgaggtgatctcggcggcgccctatcgcgat
ctcgatcgcgagacgttcgaccgggtgatcgatttcgtcgccaccggcggctacgcgctg
cgggtctacgagcgctacgccaagatcaggttgaccgaggacggcacctggcggatcgct
catccgcgcatcgcccagcagtaccggatgaacgccggcacgatcctcgaggcgccgatg
ctgcaggtgcggctgatccgcggccgctccaagagcgccatcgcccgcggcgggccgatc
ctcggcaagatcgaggagggcttcgtcgaggcgctgtcgccgggcgacaccttcaccttc
gccggccgggtgctgcgcttcgagacgctgttcgagaaccagtgcctggtctccaaggcg
gtggacgaggatccgaagatccccgcctatgccggcggcaagttcccgctgaccacctat
ctggcggcgcaggtgcgggccatgctggccgatcccgcccgctggcaggcgctgccggag
caggtttcccactggctggagatccagcagcgcaagtcgctgattcccggcccgggcgag
ctcctggtcgagacctttccgaacggccgcatgcaccacatggtgctctacccgttcgag
ggccggctcgcccaccagacgctcggcatgctgctgacccggcggctggagaaggcgcgg
gccaagccgctcggcttcgtcgccaccgactacgccatctcgatctgggggcgcggcccg
atgggcgcgatgatcgccgacgggcgcctgtcgctcgacgatctgttcgacgaggacatg
ctgggcgacgacctcgaggagtggatggccgattcctggctgctcaagcgcaccttccgc
cagtgcgcggtgatctccgggctgatcgagaagcgccatccgggccaggagaagaccggc
cggcaggtgaccgtctcggccgacctgatctacgacgtgctgcgcagccacgagccggac
cacatattgatgcgcgcgacctgggcggacgccgccaccggcctgctcgacgtcgcccgg
gtcgccgacctgctcggccgcatcaagcaccacatcgtccacaaggacctcgaccaggtc
tcgccgctcgccgtgccggtgatgctggagatcggccgcgagcgggtcgtcggcgaggcg
cgcgacgaactgctggcgcaggcggccgaggacgcgatgatcgccgccgccctcgaataa

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