Aurantimonas sp. HBX-1: LXB15_04925
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Entry
LXB15_04925 CDS
T07802
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
aub
Aurantimonas sp. HBX-1
Pathway
aub03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LXB15_04925 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aub03400
]
LXB15_04925 (uvrB)
DNA repair and recombination proteins [BR:
aub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LXB15_04925 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LXB15_04925 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Motif
Other DBs
NCBI-ProteinID:
UIJ74044
LinkDB
All DBs
Position
complement(1051476..1054379)
Genome browser
AA seq
967 aa
AA seq
DB search
MKSSRGTSMGGTTDPKQRAAAGLNPVAGLDVSLEDAGRLPEGGVTATVEALTKLISEGDP
LLKDGKVWIPHRPARPDKSEGGVPFRIASDYTPMGDQPTAIRDLVAGISERDQTQVLLGV
TGSGKTFTVANVIERTQRPALVLAPNKTLAAQLYGEFKNFFPDNAVEYFVSYYDYYQPEA
YVPRSDTYIEKESSINEQIDRMRHAATRALLERDDVIIVASVSCIYGIGSVETYTAMTFQ
MAVGDRLDQRQLLADLVAQQYKRRDMDFQRGSFRVRGDTIEIFPAHLEDRAWRISMFGDE
IEQIQEFDPLTGSKTDDLKSVKIYANSHYVTPRPTLNQAVKSIREELKHRLVELEKAGRL
LEAQRLEQRTRFDIEMIEATGSCPGIENYSRYLTGRQPGHPPPTLFEYLPDNALVFIDES
HVTVPQIGAMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWNAMRPQTVAVSATPGSWE
MEEAGGVFAEQVIRPTGLIDPPVEIRPARSQVDDLVGEIRETVAKGYRVLATVLTKRMAE
DLTEYLHEQGIRVRYMHSDIDTLERIEIIRDLRLGAFDVLVGINLLREGLDIPECGLVAI
LDADKEGFLRSETSLIQTIGRAARNIDGKVILYADRTTGSMERAIAETSRRREKQEAYNA
AHGITPASVKAHIADILDSYYEKDHVRIDVGPGAKEGALVGNNLKSHLEHLERQMREAAA
DLDFETAARLRDELKRLRAKELEFGGIPGGDAHLSDGGLGDTAADAIAFEEDAVSPVTGR
SKHGRKTKRDRSPAGGERFGPRGEPLKPRGEGSPRRPAPLSRPAPAGETPAATPATPAAA
SYFHKPSLDSMGPGTDTAVPAGPSLFRKNSLDEMTVGRTEKPTGKPAPKKPATPTAQPIS
PPVGEMSGRTEGGKSSANEPGKPADPRSTDPDSPAPIRRERIGRGSYEDPADQRRKRRPG
KTGRPGQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcctcccgcggcacctcgatgggcggcaccaccgacccgaagcagcgcgccgcc
gccgggctcaacccggtcgccggcctcgacgtcagcctcgaggatgccggccgcctgccg
gaaggcggcgtcaccgccacggtcgaggcgctgaccaagctgatctccgagggcgacccg
ctcctgaaggacggcaaggtctggatcccgcaccgccccgcacggccggacaagtcggag
ggcggcgtccccttccgcatcgcctcggactacaccccgatgggcgaccagccgaccgcc
atcagggacctcgtcgccggcatttccgagcgcgaccagacccaggtgctgctcggcgtc
accggctccggcaagaccttcaccgtcgccaacgtcatcgagcggacgcagcgcccggcg
ctcgtcctcgcgcccaacaagacgctggcggcgcagctctacggcgagttcaagaacttc
ttccccgacaacgccgtcgagtatttcgtctcctactacgactactaccagcccgaggcc
tacgtgccgcgctcggacacctatatcgagaaggaatcctcgatcaacgagcagatcgac
cggatgcgccatgccgccacccgggcgctgctcgagcgcgacgacgtcatcatcgtcgcc
tcggtctcctgcatctacggtatcggctcggtcgagacctacaccgcgatgaccttccag
atggccgtcggcgaccggctcgaccagcgccagctcctcgccgacctcgtcgcccagcag
tacaagcgccgcgacatggatttccagcgcggctccttccgcgtccgcggcgacacgatc
gagatcttccccgcccatctggaggaccgcgcctggcgcatctcgatgttcggcgacgag
atcgagcagatccaggaattcgacccgctcaccggctcgaagaccgacgacctcaagtcg
gtgaagatctacgccaactcgcattacgtcacgccccgcccgacgctgaaccaggcggtg
aagtcgatccgcgaggagctgaagcaccgcctcgtcgagctggagaaggccggccgcctg
ctggaagcccagcggctcgagcagcgcacaagattcgacatcgagatgatcgaggccacc
ggctcctgccccggcatcgagaactattcgcgctacctcaccggccgccagcccggccac
ccgccgccgaccctgttcgagtacctgcccgacaacgccctggtcttcatcgacgagagc
cacgtcaccgtgccgcagatcggcgccatgtatcgcggcgacttccgccgcaaggcgacg
ctggccgaatacggcttccgcctgccctcctgcatggacaaccggccgctgcgcttcgag
gagtggaacgccatgcggccgcagaccgtcgcggtctcggccacccccggcagttgggaa
atggaggaggccggcggcgtcttcgccgagcaggtcatccgccccaccggcctgatcgac
ccgccggtcgagatccgcccggcccgcagccaggtcgacgacctcgtcggcgagatccgc
gagaccgtcgccaagggctaccgcgtgctcgccaccgtgctcaccaagcgcatggccgag
gacctcaccgagtatctgcacgagcagggcatccgcgtccgctacatgcattccgacatc
gacacgctggagcgcatcgagatcatccgcgatctgcgcctcggcgccttcgacgtcctg
gtcggcatcaacctcctgcgcgaggggctcgacatccccgaatgcggcctcgtcgccatt
ctcgacgccgacaaggaaggcttcctgcgctcggagacctcgctgatccagaccatcggc
cgcgccgcccgcaacatcgacggcaaggtcatcctctatgccgaccgcaccaccggctcg
atggaacgcgccatcgccgagaccagccggcgccgcgagaagcaggaggcctacaacgcc
gcgcacggcatcaccccggctagcgtgaaggcgcatatcgccgacattctcgacagctac
tacgagaaggaccacgtccgcatcgacgtcggccccggcgccaaggaaggcgccctcgtc
ggcaacaacctgaaatcccatctggagcatctcgagcgccagatgcgcgaggccgccgcc
gacctcgacttcgagacggccgcccgcctgcgcgacgagctcaagcgcctgcgcgccaag
gaactcgaattcggcggcatccccggcggcgacgcccacctcagcgacggcggcctcggc
gacaccgccgccgacgcgatcgccttcgaggaggacgccgtctcgcccgtcaccggccgc
tccaagcacggccgcaagaccaagcgcgaccgctcccccgccggcggcgagcgcttcggc
ccgcgcggcgaaccgctgaagccccgcggcgaaggctcgccccgccgccccgcgccactc
tcccgcccggccccggccggcgagacgcccgccgccacgccggccacgccggccgccgcg
tcctatttccacaagccttcgctcgacagcatgggccccggcaccgacacggccgtcccc
gccggtccctcgctgttccgcaagaactccctcgacgaaatgaccgtcggccgcaccgaa
aagcccaccggcaagccggctcccaaaaagccggcgacgccgacggcacagccgatctcc
ccccctgtgggggagatgtccggcaggacagaggggggtaagtcatccgccaacgagccc
ggcaagccggccgatcctcggagcaccgaccccgactcccccgccccaatccgccgcgag
cggatcggccgcggctcctacgaggaccccgccgaccagcgccgcaagcgccgccccggc
aagaccggccgcccgggccagtag
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