Aurantimonas sp. HBX-1: LXB15_08365
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Entry
LXB15_08365 CDS
T07802
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aub
Aurantimonas sp. HBX-1
Pathway
aub03030
DNA replication
aub03430
Mismatch repair
aub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LXB15_08365 (dnaE)
03430 Mismatch repair
LXB15_08365 (dnaE)
03440 Homologous recombination
LXB15_08365 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aub03032
]
LXB15_08365 (dnaE)
03400 DNA repair and recombination proteins [BR:
aub03400
]
LXB15_08365 (dnaE)
Enzymes [BR:
aub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LXB15_08365 (dnaE)
DNA replication proteins [BR:
aub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LXB15_08365 (dnaE)
DNA repair and recombination proteins [BR:
aub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LXB15_08365 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
T2SSK
Motif
Other DBs
NCBI-ProteinID:
UIJ73627
LinkDB
All DBs
Position
1763751..1767221
Genome browser
AA seq
1156 aa
AA seq
DB search
MSEPIGDSPRFIHLRVHSAYSLLEGALKLDQIIKFAIGDAAPAIGIADTNNLFGALEFSE
KAAKAGLQPIVGCQLDVDFGDTVTEGRGGRGDRNALPMAPLVLIATSEAGYANLVEIVSL
AYLGHPDTQRPHVPIEWIEARSDDVICLTGGPLGPIGLALATDRGALARARLERLAAAFG
DRLYVELQRQEGRSRRVEAETIELAYELALPLVATNEPFFYCPDDFDAHDALLAVASNRL
VSQEDRRRLSRDHCLKTQGEMAVLFADLPEALQNTIEIARRCSYRPRTRAPILPRFAGAD
ADPTEADAAEVQELRRQAFEGLEMRLATLGLAPGESAETYQARLDFELTIIERMKFPGYF
LIVADFIKWAKAQGIPVGPGRGSGAGSLVAYSLTITDLDPLRFSLLFERFLNPDRVSMPD
FDIDFCQDRREEVIRYVQEKYGRDQVGQIITFGTLQARAVLRDVGRVLEMSYGHVDKLCK
LVPQNPANPVTLAQALVEEPRLQEAREKEEVVDRLISIALKLEGLYRHASTHAAGIVIGD
RPLSKLVPMYRDPRSDMPVTQYNMKWVEPAGLVKFDFLGLKTLTTLQKAVALIARKGIVI
DLAAIPLDDAKSYEMLTRGETVGVFQVESVGMRKALIGMRPDRFEDIIALVALYRPGPME
NIPTYNARKHGDEEVDVIHEKIVPILKETQGVIIYQEQVMQIAQVLAGYSLGEADLLRRA
MGKKIRAEMDQQRVRFVEGAVANGLEKAHANMIFDLLAKFADYGFNKSHAAAYALIAYQT
AYLKANHPVEFLAASMTLDCGNTDKLNDFRMDAQRLGITVVAPSVQTSHKAFEVGENRIF
YALAAIKGIGEQAVEHIVERRGEGRYASLEDFCARIDPKIVNKRTLEFLIAAGALDCFGH
DRAVLTANIELMASYAMRVHEGRTSGQHDMFGSAGDAPEPLRLNPAPLWTSSEKLLREFQ
AIGFYISAHPLDEYKATLKRLRVQTHAEVTAGVKRGASAGKLAGTVTSRQERKTRTGGKI
GIVQLSDPSGQYEVVLFSEVLYAFRDMLEPGASVIVTVSAEERPEGISLRVQSVQSLEDE
AVRMQKALRIFVRDAAPLQLVRSQLQTDGDSEVSVILVRDAGEREVEITLPGRYRVSPQM
ASAVKAAPGVLDVELL
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacccatcggtgacagcccgcgcttcatccatctgcgggtgcacagcgcctat
tcgctgctggaaggcgcgctgaagctcgaccagatcatcaagttcgcgatcggcgacgcg
gcgccggcgatcggcatcgccgacaccaacaatctcttcggggcgctggagttctcggag
aaggcagcgaaggccgggctgcagccgatcgtcgggtgccagctcgacgtcgacttcggc
gatacggtcaccgagggacggggcgggcgcggcgaccggaacgccctgccgatggcgccg
ctggtgctcatcgcgacgagcgaggcgggctacgccaatctcgtcgagatcgtctcgctg
gcctatctcggccaccccgacacgcagcgtccgcacgtgccgatcgaatggatcgaggcg
cgttctgacgacgtcatctgcctcaccggcggcccgctcgggccgatcggcctagcgctc
gccaccgatcggggcgctctcgcccgcgccaggctggagcggctcgcggccgccttcggc
gaccggctctatgtcgagctgcagcgccaggaggggcgcagccgccgggtcgaggcggaa
accatcgaactcgcctacgagctggcgttgccgctggtggcgaccaacgagccgttcttc
tactgcccggacgatttcgacgcgcatgacgcgctgcttgcggtggccagcaaccggctg
gtcagccaggaggaccgccgccggctgtcgcgcgaccactgcctgaagacgcagggcgag
atggcggtgctcttcgccgatctgccggaagcgctgcagaacacgatcgagatcgcccgc
cgctgctcctaccggccgcgcacccgcgcgccgatcctgccgcgtttcgccggtgccgat
gccgacccgaccgaagccgacgcggccgaggtccaggagctgcgccggcaggccttcgag
ggcctggagatgcgcctggcgacgctggggctcgccccgggcgagagcgccgagacctac
caggcccggctcgacttcgagctgaccatcatcgaacggatgaagttccccggctacttc
ctgatcgtcgcggacttcatcaaatgggccaaggcgcagggcatcccggtcggtccgggc
cgtggttccggcgcgggctcgttggtcgcctattcgctgaccatcaccgatctcgacccg
ctgcgcttctcgctgctgttcgagcgcttcctcaacccggaccgcgtgtcgatgccggat
ttcgacatcgacttttgccaggaccggcgcgaggaggtcatccgctacgtccaggagaaa
tacggccgcgaccaggtcgggcagatcatcaccttcggaacgctgcaggcgcgcgccgtg
ctgcgcgacgtcgggcgcgtgctcgaaatgtcctatggccatgtcgacaagctctgcaag
ctggtgccgcagaacccggccaacccggtgacgctggcgcaggcgctggtcgaggagccg
cggctgcaggaagcgcgcgagaaggaggaggtcgtcgaccggctgatctccatcgcgctg
aagctcgaggggctctaccgccacgcctcgacgcacgccgccggcatcgtcatcggcgac
cggccgctgtcgaagctggtgccgatgtaccgcgatccgcgttccgacatgccggtcacc
cagtacaacatgaagtgggtggagccggcgggcctggtgaagttcgacttcctcggcctg
aagacgctgacgacgctgcagaaggcggtggcgctgatcgcccgcaagggcatcgtgatc
gatctcgccgcgatcccgctcgacgacgccaagagctacgagatgctgacccgcggcgag
accgtcggggtgttccaggtggaatcggtcggcatgcgcaaggcgctgatcggcatgcgg
cccgaccgcttcgaggacatcatcgccctcgtcgcgctctaccggccgggcccgatggag
aacatcccgacctacaacgcccgcaagcacggcgacgaggaagtcgacgtcatccacgag
aagatcgtgccgatcctcaaggagacgcagggcgtcatcatctaccaggaacaggtgatg
cagatcgcccaggtcctggccggctactcgctcggcgaagccgatctcttgcgccgcgcg
atgggcaagaagatccgcgccgagatggaccagcagcgggtgcgcttcgtcgagggcgcc
gtcgccaacgggctcgaaaaagcccatgcgaacatgatcttcgatctgctcgccaagttc
gccgactacggcttcaacaagagccacgcggcggcctatgcgctgatcgcctaccagacg
gcctatctcaaggcgaaccatccggtcgagttcctcgccgcgtcgatgacgctcgattgc
ggcaacaccgacaagctcaacgatttccgcatggacgcgcagcgcctcggaattaccgtc
gtggcgccgtcggtccagacttcgcacaaggcgttcgaggtgggggagaaccggatcttc
tacgcgctcgcggcgatcaagggcatcggcgagcaggcggtcgagcacatcgtcgagcgg
cggggcgaggggcgctacgcctcgctggaggatttctgcgcccggatcgacccgaagatc
gtcaacaagcggacgctggagttcctgatcgccgccggcgccctcgactgcttcggccat
gaccgggcggtgctgacggccaatatcgagctgatggcctcctacgcgatgcgggtgcac
gagggacgcacctccggccagcacgacatgttcggctcggcgggcgacgcgccggagccg
ctgcggctcaacccggcaccgctctggacctcctcggaaaagctgctgcgcgagttccag
gcgatcggcttctacatctccgcccacccgctcgacgagtacaaggcgacgctgaagcgc
ctgcgcgtccagacccacgccgaggtcaccgccggggtgaagcgcggtgccagcgccggc
aagctcgccggcacggtcacatcccgccaggagcgcaagacgcggaccggcggcaagatc
ggcatcgtccagctctccgacccgagcggccagtacgaggtcgtcctgttctccgaggtg
ctctacgccttccgcgacatgctggagcccggcgcctcggtgatcgtcaccgtctccgcc
gaggagcgcccggagggcatctcgctgcgcgtccagtcggtgcagtcgctggaggacgag
gcggtgcgcatgcagaaggcgctgcgcatcttcgtgcgcgacgcggcgcccctgcaactg
gtccgcagccagctgcagacggacggcgacagcgaggtctcggtgatcctggtgcgcgac
gccggcgagcgcgaggtggagatcacgctgccgggccgctaccgggtctcgccgcagatg
gcgagcgcggtaaaggcggcacccggcgtgctcgacgtcgaactgctgtag
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