Aurantimonas sp. HBX-1: LXB15_10765
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Entry
LXB15_10765 CDS
T07802
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aub
Aurantimonas sp. HBX-1
Brite
KEGG Orthology (KO) [BR:
aub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aub03016
]
LXB15_10765 (rnd)
Enzymes [BR:
aub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LXB15_10765 (rnd)
Transfer RNA biogenesis [BR:
aub03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LXB15_10765 (rnd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
UIJ70264
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All DBs
Position
2263797..2264948
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AA seq
383 aa
AA seq
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MQTITTTAALAEACATFAKATFVTVDTEFIRETTFWPELCLVQMASDDLAVLVDPLAEGI
DLAPFFELMRDERVIKVFHAARQDIEIVYKLGGLVPAPLFDTQVAAMVCGFGDSIAYDQL
VARTSEGRIDKTSRFTDWRHRPLSQEQLTYALADVTYLRDVYRALKAQLEAEGRSDWLAE
EMATLADPATYDLHPDDAWRRLKLRVRKPIELQVLKEVAAWREREAREIDKPRGRIIKDD
AIYEIAQQQPRDEQALARLRTIPRGFERSNAGQEILAAVARALAVPKSDLPAIPRPPQLP
EGTAAAVEFLKVLLKIVVEEKGVAAKMIASGDDLEKLAWKGEAAEIPAMDGWRREIFGER
ALELLKGETGLVYRNRRVEVVAL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccattaccactaccgcggcgctcgccgaggcctgcgccaccttcgccaaagcc
accttcgtcaccgtcgacaccgagttcatccgcgagaccaccttctggccggagctctgc
ctcgtccagatggcctccgacgacctcgccgtgctggtcgacccgctggccgagggcatc
gacctcgcgccgttcttcgagctgatgcgcgacgagcgcgtgatcaaggttttccacgcc
gcgcgccaggacatcgagatcgtctacaagctcggcggcctcgtcccggcacccctgttc
gacacgcaggtcgcggcgatggtctgcggcttcggcgattcgatcgcctacgaccagctg
gtggcgcgcaccagcgaaggacgcatcgacaagacctcgcgcttcaccgactggcgccac
cggccgctgagccaggagcagctgacctacgccctcgccgacgtcacctatctgcgcgac
gtctaccgggcgctgaaggcgcagctggaggcggaagggcgcagcgactggctggccgag
gaaatggcgacgctcgccgacccggcgacctacgacctgcaccccgacgacgcctggcgc
aggctgaagctgcgcgtccgcaagcccatcgagctgcaggtgctgaaggaagtggctgcc
tggcgggagcgcgaggcacgcgaaatcgacaagccgcgcggccggatcatcaaggacgac
gcgatctacgagatcgcccagcagcagccccgcgacgagcaggccttggcccggctgcgg
acgattccgcggggattcgagcgcagcaatgccggccaggagatcctcgccgccgtcgcc
cgggcgctcgccgtgccgaagtccgacctgccggcgatcccccgcccgccgcaactgccg
gaaggcaccgccgcggcggtggaattcctcaaggtgctgctgaagatcgtcgtcgaggag
aagggcgtcgccgccaagatgattgcctcgggcgacgaccttgaaaagctcgcctggaag
ggcgaagccgccgagatcccggcgatggacggctggcgtcgcgagatcttcggcgaacgc
gcgctggaactgctgaagggtgagaccggtctcgtctaccgcaaccggcgcgtcgaggtg
gtggcgctgtag
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