Aurantimonas sp. HBX-1: LXB15_14560
Help
Entry
LXB15_14560 CDS
T07802
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
aub
Aurantimonas sp. HBX-1
Pathway
aub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LXB15_14560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aub03400
]
LXB15_14560
DNA repair and recombination proteins [BR:
aub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LXB15_14560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
QSregVF_b
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UIJ70943
LinkDB
All DBs
Position
complement(3054931..3055737)
Genome browser
AA seq
268 aa
AA seq
DB search
MSDLFPPAPTTLSLFDERPRPLVRVIDTETAGQRLSEDAVIEIGSVDLDLATGEIGNPMR
SFCDPAGAAINPHARKVHRITDAMLEGAPPFAEAVRPFAGAPFYAAQRAEFDRSRLRLTG
RWLCTHKLALRAFPTLPAHGLQSLVKYVPLALAPVAPLLAGEHPHRALYDAACTAVLLGA
IAARLMPRCADVADFLERAEKVSREPALLARFRFGRYKGVELARVPDAYLEWLLREPGMD
ADTLFTARHHLRSRGIRGTRVLPAAAAG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctgttcccgcccgcacccaccacactctcgctgttcgacgagcggccgcgg
ccgctcgtgcgggtgatcgataccgagaccgccggccagagactgtccgaggatgcggtg
atcgagatcggctcggtggacctcgacctcgccaccggcgagatcggcaacccgatgcgc
agcttctgcgatcccgccggggcggcgatcaacccgcatgcccgcaaggtgcaccgcatc
accgacgccatgctcgaaggcgcgccgcccttcgccgaggcagtcaggccctttgccggc
gcgcccttctatgccgcccagcgggccgagttcgaccgctcgcggctgcggcttaccggg
cgctggctgtgcacccacaagctggcgctgcgggcgttcccgacgctgccggcgcacggg
ctgcagagcctggtcaaatacgtgccgctggcgctcgccccggtggcgccgctgctcgcc
ggcgagcatccgcaccgggcgctctacgacgccgcctgcacggcggtgctcctgggggcc
atcgccgccaggctgatgccgcgctgcgccgatgtcgccgatttcctggagcgggccgag
aaggtgtcgcgcgagcctgccctgctcgcgcggttccgcttcgggcgctacaagggcgtc
gagctggcgcgcgtgccggacgcctatctcgaatggctgctgcgcgagcccggcatggac
gccgacacgctgttcaccgcccgtcatcatttgcgcagccgcggcatccgcggcacccgc
gtgctgcccgccgccgcggccgggtga
DBGET
integrated database retrieval system
