KEGG   Aurantimonas sp. HBX-1: LXB15_16155
Entry
LXB15_16155       CDS       T07802                                 
Name
(GenBank) UdgX family uracil-DNA binding protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
aub  Aurantimonas sp. HBX-1
Pathway
aub03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:aub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LXB15_16155
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aub03400]
    LXB15_16155
Enzymes [BR:aub01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     LXB15_16155
DNA repair and recombination proteins [BR:aub03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LXB15_16155
SSDB
Motif
Pfam: DUF4130 UDG C7_FIM2_N
Other DBs
NCBI-ProteinID: UIJ71233
LinkDB
Position
complement(3396413..3397885)
AA seq 490 aa
MYVAPLSFPADFDGWRVASRTALALGVPPEAMSFTVGDEGSGLFAETLPPAPAGARQPTV
PKAFPELAEKLVCHADADRFVFAYRLLWRLQTEKQLLEIASDPDIIRAREMEKAVRRDSH
KMKAFVRFREIEDPELGRHYVAWFEPFHHVVELTAPFFARRFAGMVWTILTPERSVHWDG
SDMSFLPGATKDMRPKDDDMEALWLTYYASIFNPARLKVKAMQAEMPKKYWANMPETALI
RPLIEGAEAASRRMIETAPTLPSLRHERQSERERMARRVAAEASEERPRPADIEAARDAA
KHCRACPLWEPATQTVFGRGPADAPVIFVGEQPGDQEDLAGEPFVGPAGKVFDQALAAAG
IDRSQAYVTNAVKHFKFVPRGKRRIHAKPNAGEIQACRWWLDIERDLIRPRLIVALGATA
AAAVLGRTVTIRDTRSKLIDLDAATQLLVTVHPSYILRLPDEAAKQRESAAFTADMALVR
RTVPELALAA
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgtacgtcgccccgctctccttccccgccgacttcgacggctggcgcgtcgcctcccgc
acggcgctggcgctgggcgttccccccgaggcaatgagcttcaccgtcggcgatgaggga
tccggcctgttcgccgagaccttgcccccggcgcccgccggcgccaggcagcccaccgtg
ccgaaggcgtttccggagctggcggaaaagctcgtctgccacgccgatgccgaccgcttc
gtcttcgcctaccggctgctctggcggctgcagacggagaagcagctgctggagatcgcc
tccgatcccgacatcatccgggcgcgggagatggaaaaggcggtgcgccgcgacagccac
aagatgaaggccttcgtgcgcttccgcgagatcgaggatcccgagctcggccgacactac
gtcgcgtggttcgagcccttccaccacgtcgtcgagctgaccgcgccgttcttcgcgcgg
cgcttcgccggcatggtctggacgatcctgacgcccgagcgctcggtgcactgggatggt
tcggacatgtccttcctgccgggggcgacgaaggacatgcggccgaaggacgacgacatg
gaggcgctctggctgacctactacgcgtcgatcttcaatccggcgcggctgaaggtgaag
gcgatgcaggccgagatgccgaagaaatactgggcgaacatgcccgagacggcgttgatc
cggcccctgatcgagggcgccgaggcagcctcgcggcggatgatcgaaaccgcgccgacc
ctgccgagtttacgccacgaacgacagtcggagcgcgaacggatggccagaagagtcgcg
gcggaggcatcggaggaacgcccgcggccggcggatatcgaagccgcccgcgatgcggcg
aagcattgccgggcctgtccgctatgggagccggcgacgcagaccgtgttcggccgtggc
cccgccgacgcgccggtgatcttcgtcggggagcagccgggcgatcaggaggatctcgcc
ggcgagcccttcgtggggcccgctggtaaggtgttcgaccaggcgctggcggcggccggg
atcgaccggagccaggcctacgtcaccaatgcggtcaaacacttcaagttcgtgccccgc
ggcaagcggcgcatccacgccaagcccaatgcgggcgagatccaggcgtgccgctggtgg
ctggacatcgagcgcgacctgatccgcccccggctcatcgtggcgctgggggcgacggcc
gcggcggcggtgctcggccggaccgtgacgatccgcgacacgcgatccaagctgatcgac
ctcgacgcggcgacgcagctcctggtcacggtgcatccgtcctacatcctgcgcctgccg
gacgaagccgccaagcagcgggaaagcgccgccttcaccgccgacatggcgctggtgcgc
cggacggtgccggaactggcgctcgccgcctga

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