Aurantimonas sp. HBX-1: LXB15_16155
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Entry
LXB15_16155 CDS
T07802
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
aub
Aurantimonas sp. HBX-1
Pathway
aub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LXB15_16155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aub03400
]
LXB15_16155
Enzymes [BR:
aub01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LXB15_16155
DNA repair and recombination proteins [BR:
aub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LXB15_16155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
C7_FIM2_N
Motif
Other DBs
NCBI-ProteinID:
UIJ71233
LinkDB
All DBs
Position
complement(3396413..3397885)
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AA seq
490 aa
AA seq
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MYVAPLSFPADFDGWRVASRTALALGVPPEAMSFTVGDEGSGLFAETLPPAPAGARQPTV
PKAFPELAEKLVCHADADRFVFAYRLLWRLQTEKQLLEIASDPDIIRAREMEKAVRRDSH
KMKAFVRFREIEDPELGRHYVAWFEPFHHVVELTAPFFARRFAGMVWTILTPERSVHWDG
SDMSFLPGATKDMRPKDDDMEALWLTYYASIFNPARLKVKAMQAEMPKKYWANMPETALI
RPLIEGAEAASRRMIETAPTLPSLRHERQSERERMARRVAAEASEERPRPADIEAARDAA
KHCRACPLWEPATQTVFGRGPADAPVIFVGEQPGDQEDLAGEPFVGPAGKVFDQALAAAG
IDRSQAYVTNAVKHFKFVPRGKRRIHAKPNAGEIQACRWWLDIERDLIRPRLIVALGATA
AAAVLGRTVTIRDTRSKLIDLDAATQLLVTVHPSYILRLPDEAAKQRESAAFTADMALVR
RTVPELALAA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtcgccccgctctccttccccgccgacttcgacggctggcgcgtcgcctcccgc
acggcgctggcgctgggcgttccccccgaggcaatgagcttcaccgtcggcgatgaggga
tccggcctgttcgccgagaccttgcccccggcgcccgccggcgccaggcagcccaccgtg
ccgaaggcgtttccggagctggcggaaaagctcgtctgccacgccgatgccgaccgcttc
gtcttcgcctaccggctgctctggcggctgcagacggagaagcagctgctggagatcgcc
tccgatcccgacatcatccgggcgcgggagatggaaaaggcggtgcgccgcgacagccac
aagatgaaggccttcgtgcgcttccgcgagatcgaggatcccgagctcggccgacactac
gtcgcgtggttcgagcccttccaccacgtcgtcgagctgaccgcgccgttcttcgcgcgg
cgcttcgccggcatggtctggacgatcctgacgcccgagcgctcggtgcactgggatggt
tcggacatgtccttcctgccgggggcgacgaaggacatgcggccgaaggacgacgacatg
gaggcgctctggctgacctactacgcgtcgatcttcaatccggcgcggctgaaggtgaag
gcgatgcaggccgagatgccgaagaaatactgggcgaacatgcccgagacggcgttgatc
cggcccctgatcgagggcgccgaggcagcctcgcggcggatgatcgaaaccgcgccgacc
ctgccgagtttacgccacgaacgacagtcggagcgcgaacggatggccagaagagtcgcg
gcggaggcatcggaggaacgcccgcggccggcggatatcgaagccgcccgcgatgcggcg
aagcattgccgggcctgtccgctatgggagccggcgacgcagaccgtgttcggccgtggc
cccgccgacgcgccggtgatcttcgtcggggagcagccgggcgatcaggaggatctcgcc
ggcgagcccttcgtggggcccgctggtaaggtgttcgaccaggcgctggcggcggccggg
atcgaccggagccaggcctacgtcaccaatgcggtcaaacacttcaagttcgtgccccgc
ggcaagcggcgcatccacgccaagcccaatgcgggcgagatccaggcgtgccgctggtgg
ctggacatcgagcgcgacctgatccgcccccggctcatcgtggcgctgggggcgacggcc
gcggcggcggtgctcggccggaccgtgacgatccgcgacacgcgatccaagctgatcgac
ctcgacgcggcgacgcagctcctggtcacggtgcatccgtcctacatcctgcgcctgccg
gacgaagccgccaagcagcgggaaagcgccgccttcaccgccgacatggcgctggtgcgc
cggacggtgccggaactggcgctcgccgcctga
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