Aurantimonas sp. HBX-1: LXB15_16310
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Entry
LXB15_16310 CDS
T07802
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
aub
Aurantimonas sp. HBX-1
Brite
KEGG Orthology (KO) [BR:
aub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aub03009
]
LXB15_16310
Enzymes [BR:
aub01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LXB15_16310
Ribosome biogenesis [BR:
aub03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LXB15_16310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
UIJ71262
LinkDB
All DBs
Position
complement(3443220..3445121)
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AA seq
633 aa
AA seq
DB search
MSDTTNGDDRKGRGAGKGGRGGKPGDGPRRPSAGRPAGGKGGDRGERPKRAASGDGPARP
PRDGDRPRGGERPRRAEGERPKSFRPRPDGDAPARGRGDGEAGGKPPFKPRSRGMLSHGG
SAGEGRPERPRSYGRLQHDGAKDERKPRPVSDDRKSRASSSDARDAGPKRPPRAAPAVDA
TGTMRIARRLARAGIASRRDAEGMIADGRVRVNGKVLDTPALDVSGSDVIEVDGTRLPAI
ERTRLWLFHKPAGTVTTNRDPEGRPTVFDRLPSDMPRVLSIGRLDISTEGLLLLTNDGGL
ARVLELPSTGWLRRYRVRAHGTISQAKLDELRQGIAIDGVFYGAIEATLDREQGANVWLT
LGLREGKNREVKRVLGHLGLDVNRLIRLSFGPFQLGDLKEGAVQEIKGKMLREQLGDRLI
EDAGADFEAPVTNVFSNKPVQAEEPGPDLRPKRRGDWVSASETAPNKKKVREAKRDDALG
RLDTRSPRGERDDRSARKPAGGRPERSERPGRPERGGRDDGDRRTGGRFDGPKKSFGDRG
AGDGDRSPAQKPFGEPKRSANVWIAPGAKPLGARNAQAAQNRAAGERPGSDRPRGERPSR
GRPSPTDPSKRAGKPGGRPKPGGATPPRRPRKD
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacgacgaacggcgacgacaggaaaggccgcggcgccggcaagggcggtcgc
ggcggcaagcccggcgacggtccgcggcggccatccgccggcaggccggccggcggcaag
ggcggcgaccgcggcgagcggccgaagcgcgccgcctccggcgacggcccggcccggccg
cctcgcgacggcgaccggccgcgcggcggcgagcggccccggcgcgccgagggcgagcgg
ccgaaaagcttccgtccgcgtcccgatggcgacgcgccagcccggggccgcggcgatggc
gaggcgggcggcaagccgcccttcaagccgcgcagccgcggcatgctctcgcatggcggc
agcgccggcgagggccgcccggagcggccgcgcagctacggccgcctgcagcacgacggc
gccaaggacgagcgcaagccgcgccccgtcagcgacgaccgcaagtcgcgcgcgtcgagc
agcgatgcccgcgacgcggggccgaagcggccgccgcgtgcggcgccggcggtcgacgca
accggaacgatgcggatcgcccgccgtctcgcccgcgccggcatcgcctcgcgccgcgac
gccgagggcatgatcgccgacggccgcgtccgggtgaacggcaaggtgctcgacacgccg
gccctcgacgtcagcggcagcgacgtcatcgaggtcgacggcacgcggctaccggcgatc
gagcgcacccgtctctggctgttccacaagcccgccggcacggtcaccaccaaccgcgat
ccggagggccgcccgacggtattcgaccggctgcccagcgacatgccgcgggtgctgtcg
atcggccggctcgacatcagcaccgagggtctcctgctgctgaccaacgacggcggcctc
gcccgggtgctggagctgccctcgaccggctggctgcggcgctaccgggtgcgggcgcac
ggcaccatctcgcaggccaagctcgacgagctgcgccagggcatcgccatcgacggggtg
ttctacggtgccatcgaggcgacgctggaccgcgaacagggcgccaatgtctggctgaca
ctggggcttcgcgagggcaagaaccgcgaggtcaagcgcgtgctcggccatctcggcctc
gacgtgaaccgcctgatccgcctgtccttcggtccgttccagctgggcgacctgaaggag
ggcgcggtccaggagatcaagggaaagatgctgcgcgagcagctcggcgatcggctgatc
gaggatgccggcgccgacttcgaggcgccggtgaccaacgtgttctccaacaagccggtg
caggccgaggagccgggcccggacctgcggccgaagcgccgcggcgactgggtgtcggcg
agcgagacggcgccgaacaagaagaaggtccgcgaggccaagcgcgacgatgcgctcggc
cggctcgacacgcgctcgccacgcggcgagcgcgacgaccggtccgcccgcaagccggcc
ggcggccggccggagcgctccgagcggcccggtcgtcccgagcggggcgggcgggacgac
ggcgaccggcggaccggcggccgcttcgacggaccgaagaaatccttcggcgaccgcgga
gccggcgacggcgaccgctcgcccgcccagaagccgttcggcgaaccgaaacgctcggcc
aatgtctggatcgcaccgggcgccaagccactgggtgcccgcaacgcgcaggcggcgcag
aaccgtgccgccggcgagcggccgggcagcgaccggccgcggggcgagcgcccgtcgcgc
ggccgcccgtcgccgaccgatccgagcaagcgcgccggcaagcccggcggccggccgaag
ccgggtggcgcgacgccgccgcggcgtccccgcaaggactga
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