Aurantimonas sp. HBX-1: LXB15_18160
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Entry
LXB15_18160 CDS
T07802
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aub
Aurantimonas sp. HBX-1
Pathway
aub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LXB15_18160 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aub03400
]
LXB15_18160 (mutM)
Enzymes [BR:
aub01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LXB15_18160 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LXB15_18160 (mutM)
DNA repair and recombination proteins [BR:
aub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LXB15_18160 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
AadA_C
Hc1
Motif
Other DBs
NCBI-ProteinID:
UIJ71600
LinkDB
All DBs
Position
3832415..3833305
Genome browser
AA seq
296 aa
AA seq
DB search
MPELPEVETVRRGLVDVMEGARIDHIVLSRPDLRFPLPERFAERLAGRRIEALGRRAKYL
LAEIEGGLVLAMHLGMSGSFRIESPEGAVVPGVFAHPRSSDRLHDHVRFQLTTRDGAAAS
VVFNDPRRFGYMSLIERVAFDAHPHFAGLGIEPTGNELSGTALAPFFAGRAAPLKAVLLD
QRVIAGLGNIYVCEALWRARLSPRRAAGTIVRKDGGASQRLERLATEIRATIADAIAAGG
SSLRDYRQADGSLGYFQHSFAVYGREDEPCPREDRGVVRRIVQSGRSTFFCPVCQR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgccagaggtcgagaccgtccgccgcggcctcgtcgacgtgatggaggga
gcgcgcatcgaccatatcgtcctgtcgcggccggatctgcgcttcccgctgcccgagcgc
ttcgccgaacggctggccggccggcgcatcgaagcgctgggccggcgggcgaaatatctc
ctcgccgagatcgagggcgggctggtgctggcgatgcatctcggcatgtccggctcgttc
cgcatcgagagccccgaaggcgccgtcgtgcccggcgtcttcgcgcatccgcgctccagc
gatcgcctgcacgaccacgtgcgcttccagctgacgacgcgggacggtgccgccgccagc
gtggtgttcaacgatccgcgccgcttcggctacatgagcctgatcgagcgggtggcattc
gacgcgcatccgcattttgccgggctcgggatcgagccgacggggaacgagctgtccggc
acggcgctggcgccgttcttcgccggccgcgccgcgccgctgaaggcggtgctgctcgac
cagcgggtgatcgccgggctcggcaacatctatgtctgcgaggcgctgtggcgggcgcgg
ttgtcgccgcgccgcgccgcgggaacgatcgtgcgcaaggacggcggggccagccagcgg
ctggagcggctcgccacggaaatccgcgcgacgatcgccgacgcgatcgccgccggcggc
tcgtcgctgcgcgactatcgccaggccgacggctcgctcggctatttccagcacagcttc
gccgtctatggccgcgaggacgagccctgcccgcgggaagaccggggcgtcgtccggcgc
atcgtccagtccggccgctcgaccttcttctgcccggtctgccagcgctga
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