Aurantimonas sp. HBX-1: LXB15_18320
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Entry
LXB15_18320 CDS
T07802
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aub
Aurantimonas sp. HBX-1
Brite
KEGG Orthology (KO) [BR:
aub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aub03016
]
LXB15_18320 (truB)
Enzymes [BR:
aub01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LXB15_18320 (truB)
Transfer RNA biogenesis [BR:
aub03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LXB15_18320 (truB)
Prokaryotic type
LXB15_18320 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UIJ71631
LinkDB
All DBs
Position
complement(3860314..3861300)
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AA seq
328 aa
AA seq
DB search
MARRGKKPKGRPVNGWVILDKPKGMGSTDAVAKLKRLYFAQKTGHAGTLDPLASGMLPIA
FGDATKTVPFVMDGRKVYRFTVRWGAETTTDDTEGTVAQSSDLRPSEADIRLAMEDYVGE
ISQVPPTFSAIKIAGERAYDLAREGEVVEIAARTVSVHRLELQSLPDADTAVFEAECGKG
TYVRAIARDLGRDLGCFGHVIDLRRVSVGGFTEADMVTLDDLEAAAEEGRETLDAEAVEA
GATARVVDYGPLDEYLINPEAALCDLYEVMLSEEQAGRVLSGNSVLLRGRDAPASCDEAF
ATGHGRLIALGSIDQGSFHPRRVFGGRG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgcggcaagaagccgaagggccgtccggtcaatggctgggtgattctggac
aagccgaagggcatgggctcgaccgacgcggtggccaagctgaagcggctgtatttcgcg
cagaagaccggccatgccggcacgctcgatccgctcgcctccggcatgctgccgatcgcc
ttcggcgacgccaccaagaccgtccccttcgtgatggacgggcgcaaggtctaccgcttc
accgtgcgctggggcgccgaaaccacgaccgacgacactgaggggaccgtcgcgcagtcg
tcggacctgcgtccgagcgaggcggacattcgcctggcgatggaagactatgtcggcgag
atcagccaggtgccgccgaccttctcggcgatcaagatcgccggcgagcgggcctacgat
cttgcccgcgagggcgaggtggtggagatcgccgcccgcacggtctccgtgcaccggctg
gaactgcagtcgctgccggatgccgatacggcggtgttcgaggccgagtgcggcaagggc
acctatgtgcgcgccatcgcccgcgacctcggccgcgacctcggctgcttcggccatgtg
atcgacctgcgccgggtttctgtcggtggtttcaccgaggccgacatggtgacgctggac
gatctcgaggcggcggccgaggagggccgcgagaccctcgacgccgaagcggtggaagcc
ggggcgacggcgcgggtcgtcgattacgggccgctcgacgaatatctgatcaaccccgag
gccgcgctctgcgacctctacgaggtgatgctgtcggaggagcaggcggggcgcgtactg
tccggcaattcggtgctgctgcgcgggcgcgacgcgccggcctcctgcgacgaggccttc
gcgaccggccacggtcggctgatcgcgctcggctcgatcgaccagggttcgttccatccg
cggcgcgtcttcggcggccgcggctga
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