Aurantimonas sp. HBX-1: LXB15_18790
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Entry
LXB15_18790 CDS
T07802
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aub
Aurantimonas sp. HBX-1
Pathway
aub03030
DNA replication
aub03410
Base excision repair
aub03420
Nucleotide excision repair
aub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LXB15_18790 (polA)
03410 Base excision repair
LXB15_18790 (polA)
03420 Nucleotide excision repair
LXB15_18790 (polA)
03440 Homologous recombination
LXB15_18790 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aub03032
]
LXB15_18790 (polA)
03400 DNA repair and recombination proteins [BR:
aub03400
]
LXB15_18790 (polA)
Enzymes [BR:
aub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LXB15_18790 (polA)
DNA replication proteins [BR:
aub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LXB15_18790 (polA)
DNA repair and recombination proteins [BR:
aub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LXB15_18790 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LXB15_18790 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DNA_polI_exo1
HHH
HHH_2
IMS_HHH
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
UIJ74238
LinkDB
All DBs
Position
3965611..3968532
Genome browser
AA seq
973 aa
AA seq
DB search
MNKGDHLFLVDGSAYIFRAYHALPPLSRKSDGMPVGAVAGFCNMLWKLVEESRETSVGVA
PTHFAVIFDHSSTTFRNELYSEYKANRTAPPEDLVPQFALIREAVRAFDLPCIEKQGYEA
DDLIAAYTCRAIEAGGDVTIVSSDKDLMQLIRPGVVLYDQMKDKRLGRDEVREKFGVFPE
KMIDLQALVGDTSDNVPGVPGIGPKTAAQLLEEFGDLETLLARAGEIKQVKRRENLIAFA
DQARLSKQLVTLDCDTPLDVPLDDLFIHEPDGEKLVAFLKAMEFVTLTRRVAARLGTDAS
EVAQAEIAVEGPARGPDLDPATAPAPAGAAQLSLTPAGLAESRRAAAANSVFDRSAYVTI
RDAATLAAWMDEARQTGILAVDTEISSLSAMSGDLIGVSFATRAGRAAYLPLAHVSPSGE
ADLLSDKKVEEEIGPQVPFAEAMALLKLVLEDAAILKIGQNIKFDYLVLRRHGITVAPFD
DTMLISYALDASASLEGHGMDELSERLLGHKPISYKELCGSGRGLKAIASCPIDKVTEYA
AEDADVTLRLWLVLKPRLAAEGLASVYERLERPLVPVLARMEERGITTDRQILSRLSGRF
AQKLAGLEAEIAELAGEAFNPGSPKQLGDILFGKLGLPGGRKTKTGQWSTDVKVLEELAA
EGHELPRRIVDWRQLAKLKGTYTDTLPAHMDREGRIHTSYAMASTTTGRLSSSEPNLQNI
PVRTEEGRAIRTAFVAPPGKLLVSADYSQIELRILAHIADIPQLKDAFRQRHDIHAMTAS
EMFGVPVEGMPAEVRRRAKAINFGIIYGISAFGLANQLAIPRDEAGLYIKRYFERFPGIR
DYMDSTKAFAKEHLYVETLFGRRVHYPDIKSPNPSVRAFCERAAINAPIQGTAADIIRRA
MIRMEPALAEAGLSARMLLQVHDELVFEVEEDEVEATLPVIRQVMAEAAHPRVDLSVPLE
VDAKAAGNWEEAH
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagggcgaccacctcttcctcgtcgacggctcggcctacatcttccgggcctat
cacgcgctgccgccgctcagccgcaagtccgacggcatgcccgtcggggcggtcgccggc
ttctgcaacatgctgtggaaactcgtcgaggagtcgcgcgagacgtcggtgggcgtggcg
cccacgcatttcgcggtgatcttcgaccattcctcgacgacgttccgcaacgagctctat
tccgagtacaaggccaaccgcaccgcaccgccggaagacctcgtgccgcaattcgcgctg
atccgcgaggcggtgcgcgccttcgacctgccctgcatcgagaagcagggctacgaggcc
gacgacctcatcgccgcctatacgtgccgggcgatcgaggccggcggcgacgtcaccatc
gtgtcctccgacaaggacctgatgcagctgatccgaccgggcgtcgtgctctacgaccag
atgaaggacaagcggctcggccgcgacgaggtgcgcgagaagttcggcgtcttcccggag
aagatgatcgacctgcaggcgctggtcggggacacgtccgacaacgtcccgggcgtgccc
ggcatcgggccgaagacggcggcgcagctgctggaggagttcggcgacctcgagacgctg
ctggcgcgggccggcgagatcaagcaggtgaagcggcgcgagaaccttatcgccttcgcc
gatcaggcgcggctgtcgaagcagctggtgacgctcgactgcgacaccccgctcgacgtg
ccgctggacgatctgttcatccacgagccggacggcgagaagctcgtcgccttcctcaag
gcgatggagttcgtcacgctgacgcggcgcgtcgcggccaggctcggcaccgacgccagc
gaggtggcgcaggccgagatcgccgtcgaaggcccggcccgcggccccgacctcgatccg
gccaccgcaccggctccggcgggcgcggcacagctgagcctcacccctgcaggcctggcg
gagagccgccgcgccgcggcggcgaattccgtcttcgaccgcagcgcctacgtgacgatc
cgcgacgcggcgacgctcgcggcctggatggacgaggcgcgccagaccggcatcctcgcc
gtcgacaccgagatctcgtcgctgtcggcgatgagcggcgacctgatcggcgtctccttc
gccaccagggccggccgggcggcctacctgccgctcgcccacgtctcgccgtccggcgag
gccgatctcctgtccgacaagaaggtcgaggaggagatcgggccgcaggtgccgttcgcc
gaggcgatggccctgctgaagctggtgctggaggacgcggcgatcctcaagatcggccag
aacatcaagttcgactatctcgtcctgcggcgccacggcatcaccgtcgcgcccttcgac
gacacgatgctgatctcctacgccctcgatgcctcggcttcgctcgagggccacggcatg
gacgaattgtccgagcggctgctcggccacaagccgatctcctacaaggagctgtgcggg
tcggggcgcggcctcaaggcgatcgccagctgcccgatcgacaaggtgaccgaatacgcc
gccgaggatgccgacgtgacgctgcggctgtggctggtgctgaagccgcgcctggcggcc
gagggcctcgcctcggtctacgagcggctggagcggccgctggtgccggtgctggcgcgc
atggaggagcgcggcatcaccaccgaccggcagatcctgtcgcggctgtccggccgcttc
gcgcagaagctggcggggctcgaggcggagatcgccgagctggccggcgaggcgttcaat
cccggctcgcccaagcagctgggcgacatcctgttcggcaagctcggcctgccgggcggg
cgcaagaccaagaccggccagtggtcgaccgacgtgaaggtgcttgaggagctcgccgcc
gagggccacgagctgccgcgccgcatcgtcgactggcgccagctggccaagctcaagggc
acctataccgacacgctgccggcgcacatggaccgcgagggccggatccacaccagctac
gccatggcgtcgacgaccaccgggcggctctcctcctccgagccgaacctgcagaacatc
ccggtgcgcaccgaggaggggcgggcgatccgcaccgccttcgtcgcgccgcccggcaag
ctgctggtctcggccgactacagccagatcgagctgaggatcctcgcccatatcgccgac
ataccgcagctgaaggacgccttccgccagcgccacgacatccacgccatgaccgcgtcg
gaaatgttcggcgtgccggtggaggggatgccggccgaggttaggcggcgcgccaaggcg
atcaatttcggcatcatctacggcatctccgccttcggcctcgccaaccagctggcgatc
ccgcgcgacgaggccgggctctacatcaagcggtatttcgagcgcttcccgggcatccgc
gactacatggattccaccaaggccttcgccaaggaacatctctacgtcgagacgctgttc
ggccggcgggtgcactatcccgacatcaagtcgcccaacccctcggtgcgcgccttctgc
gagcgcgccgcgatcaacgcgccgatccagggaaccgccgccgacatcatccgccgcgcc
atgatccgcatggagccggcgctggcggaggcgggcctttcggctcggatgctgctgcag
gtgcatgacgagctggtcttcgaggtcgaggaggacgaggtggaggcgacgctgccggtc
atccggcaggtgatggcggaggcggcccacccgcgggtcgacctctcggtaccgctcgag
gtcgacgccaaggctgccggtaactgggaagaggcgcactga
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