Aurantimonas sp. HBX-1: LXB15_19495
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Entry
LXB15_19495 CDS
T07802
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
aub
Aurantimonas sp. HBX-1
Pathway
aub03030
DNA replication
aub03430
Mismatch repair
aub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LXB15_19495 (holA)
03430 Mismatch repair
LXB15_19495 (holA)
03440 Homologous recombination
LXB15_19495 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aub03032
]
LXB15_19495 (holA)
03400 DNA repair and recombination proteins [BR:
aub03400
]
LXB15_19495 (holA)
Enzymes [BR:
aub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LXB15_19495 (holA)
DNA replication proteins [BR:
aub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LXB15_19495 (holA)
DNA repair and recombination proteins [BR:
aub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LXB15_19495 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
UIJ71842
LinkDB
All DBs
Position
complement(4118468..4119511)
Genome browser
AA seq
347 aa
AA seq
DB search
MAQKKAGEVEAFLSRPDFSFPVILLYGPDPGLVSERSDKIAAQSGVDPDDPFAAVRLSAD
DLEKDIGRLYDEARTLSLFGGKRLIRVRGAGAGKALAEAVATLAEEKLEGAVLIVEAGDL
KKNAALRTSVERARFAMALPCYQDEGRALDQMIDEEFAASGLTIDRAARDELRSRLGANR
LASRGEVRKLCLYALGTRGVVEEDVRAIVGDVSADTLEETIDATASGEVRRLPHLVDRLV
TAGTATFQLHQGLLRYFQQLQAMREMVERGGEPIGRVVERRRPHFRRRHAMEVALAAWPL
ERIAPTLRRIEADILASRKESALALTITRRTLLDVAVEAARLKARRN
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaaaggccggcgaggtcgaagccttcctgtcgcggccggacttctccttc
ccggtcatcctcctctacggccctgatcccggcctcgtctccgaacgctccgacaagatc
gctgcccagtccggcgtcgaccccgacgacccgttcgccgcggtgcgcctgtcggccgac
gacctcgagaaggatatcgggcggctctacgacgaggcccggacgctgtcgctgttcggc
ggcaagcgtctgatccgcgtgcgcggggcaggggccggcaaggcgctggcggaagccgtc
gcgacgctggcggaggagaagcttgagggcgccgtgctgatcgtcgaggcgggcgatctg
aagaagaacgcggcgctgcgcaccagcgtcgagcgcgcccgcttcgccatggcgctgccc
tgctaccaggacgagggccgcgccctcgaccagatgatcgacgaggaattcgccgccagc
ggcctgaccatcgaccgggcggcgcgcgacgagctgcgctcccggctgggcgccaaccgg
ctcgcctcgcgcggcgaggtgcgcaagctctgcctctatgcactcggcacgcggggcgtc
gtcgaggaggatgtgcgggcgatcgtcggcgacgtctccgccgacacgctggaggagacg
atcgacgccaccgccagcggcgaggtgcggcgcctgccgcatctggtcgaccggctggtc
accgccggtaccgcgaccttccagctgcaccaggggctgctgcgctatttccagcagctg
caggcgatgcgcgagatggtggagcgcggcggggagccgatcgggcgggtcgtcgagcgg
cggcggccgcatttccgtcgccgccacgcgatggaggtcgcgctcgccgcctggccgctg
gagcgcatcgccccgacattgcgccggatcgaggcggacatcctcgcgagccgcaaggaa
agcgcactcgcgctgaccatcacccggcggacgctgctcgacgtcgccgtcgaggcggca
cggctgaaggcgcgccggaactag
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