KEGG   Aurantimonas sp. HBX-1: LXB15_20430
Entry
LXB15_20430       CDS       T07802                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
aub  Aurantimonas sp. HBX-1
Pathway
aub00300  Lysine biosynthesis
aub00470  D-Amino acid metabolism
aub01100  Metabolic pathways
aub01110  Biosynthesis of secondary metabolites
aub01120  Microbial metabolism in diverse environments
aub01230  Biosynthesis of amino acids
Module
aub_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:aub00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LXB15_20430 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LXB15_20430 (dapF)
Enzymes [BR:aub01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     LXB15_20430 (dapF)
SSDB
Motif
Pfam: DAP_epimerase Hydrolase CntK_N DUF2924 PmbA_TldD_2nd
Other DBs
NCBI-ProteinID: UIJ72009
LinkDB
Position
complement(4318896..4319804)
AA seq 302 aa
MTDRAETSDGHWVPFARMNGLGNEILVADLRGGNARIAADAARALAAVDATRFDQIMAIH
DPLTPGTDAYIRIINRDGSEAEACGNGTRCVVQALAAETGRRDFTFETRAGLLAAGERPD
GLIAVDMGMPRFAWNDIPLAEEFADTRAIELQIGPIDAPVLHSPSVASMGNPHAIFWVDR
DVWDYELDRFGPILENHPIFPERANISIARVTGRAALTLRTWERGVGLTRACGSAACAAA
VSAARTRRTDRIVTVTVPGGDLLIEWRDDDHVVMTGPAEWEWSGRLDPATGAFERDGEPV
PA
NT seq 909 nt   +upstreamnt  +downstreamnt
atgacggacagggccgaaacttctgacgggcattgggtcccgttcgcgcggatgaacggg
ctggggaacgagatcctcgttgccgacctgcgcggcggcaacgcgcgtatcgccgccgac
gcggcgcgagccctggcggccgtcgacgcgacgcgtttcgaccagatcatggcgatccac
gatccgctgacccccggcaccgatgcctacatccgcatcatcaaccgcgacggctccgag
gccgaggcgtgcggcaacggcacgcgctgcgtcgtccaggcgctcgccgccgagaccggc
cggcgggacttcaccttcgagacccgcgccggcctgcttgccgccggagagcgcccggac
gggctgatcgccgtcgacatgggcatgccgcgctttgcctggaacgacattccgctggcc
gaagaattcgccgacacgcgggcgatcgagctgcagatcgggccgatcgacgcgccggtg
ctgcattcgccatccgtcgcctcgatgggcaacccgcacgcgatcttctgggtggaccgg
gacgtctgggattacgagctcgaccggttcggcccgatcctcgagaaccatccgatcttt
cccgagcgcgccaacatctccatcgcccgcgtcaccggccgcgccgcgctgacgctgcgc
acctgggagcgcggcgtcggcctcacccgcgcctgcggctcggcggcctgtgctgccgcc
gtctcggccgcccgcacgcgccgcaccgaccggatcgtcaccgtcaccgtccccggcggc
gacctgctgatcgagtggcgcgacgacgaccatgtggtgatgaccggtcccgccgaatgg
gaatggtcgggacggctcgatccggcaaccggtgccttcgaacgcgacggcgagccggtg
ccggcctga

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