Aneurinibacillus uraniidurans: PO771_07125
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Entry
PO771_07125 CDS
T09970
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
aud
Aneurinibacillus uraniidurans
Pathway
aud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PO771_07125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aud03019
]
PO771_07125
Messenger RNA biogenesis [BR:
aud03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PO771_07125
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
WCN39158
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All DBs
Position
1407641..1409305
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AA seq
554 aa
AA seq
DB search
MSKLNQKALSIFALGGVGEIGKNMYVVQYADDIVVIDAGLKFPEEEMLGIDIVIPDITYL
QENKDKVRGILITHGHEDHIGGLSYVLRRMNVPVYATKLTLGLIEGKLKEAGLLGEAKLN
LIDNKSEVQLGCFTASFFKTNHSIPDSVGVCLDTPEGVVVHTGDFKFDQTPVNNQNADLA
KMAQIGDRGVLALLSDSTNAERPGYTGSEREVGEAIMEQFHKCSGRIIVATFASNIHRIQ
QVVDAAARYDRKITVIGRSMVNVVNIAVDLGYLNVPEGMLVEPEEINKLPAEQVVILSTG
SQGEPMSALTRMARSAHRKVDILPGDTVLIAATPIPGNEKYVARTVDQLYRIGADVVYGS
DIHVSGHGSAEELKLMLNLMRPQYFLPIHGEFRMLRQHAILAEQCGVQPENIFMLDNGDT
VEIQNNRARYGPKVQSGIVLIDGLGIGDVGNIVLRDRKLLSQDGILVVVVTLSKQNGTIL
AGPDIISRGFVYVRESEALLDEANRIVGQTLQRCMDENVNEWSSLKTNVRDALGRFLYEQ
TRRRPMILPIIMEV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
ttgtctaaactaaaccagaaagctctgtcgatttttgctctgggcggcgtgggcgaaatc
ggcaaaaacatgtacgtagttcagtacgcggatgacatcgtagtaatcgatgccggactg
aaattccccgaagaggaaatgctcggtattgatatcgtcatcccggacattacgtacttg
caggaaaacaaggacaaggtacgagggatcctcattacacacggtcacgaagaccacatt
gggggtctttcgtatgtgttacgccgcatgaatgtacccgtatacgcaactaagctaaca
cttggtctcatcgaaggaaagctgaaagaagcgggactgcttggcgaagcaaagttgaat
ctgattgataacaaatcagaagtacagcttggatgcttcacagcttcgttctttaaaacg
aatcacagcattccggattctgtaggcgtttgcctggatactccagaaggtgtggttgtt
cacacaggtgactttaagtttgaccagacgccggtgaataaccagaatgcagatcttgct
aaaatggcacagatcggtgaccgaggagtattagcccttctgtccgatagcacgaatgcg
gagcgcccaggttatacgggttccgaacgtgaagtaggcgaggcgattatggagcaattc
cataagtgcagtgggcgcatcatcgttgcgacgttcgcgtcaaacattcatcgcattcaa
caggttgtagacgctgccgcgcgctatgaccgcaaaattacagtgattggccgctcgatg
gtaaacgttgtgaacatcgcggtagaccttgggtacttgaacgtaccagaaggcatgctt
gttgaaccggaagagattaataagctcccggctgaacaggttgtcattctgtcgacaggc
agccagggtgagccaatgtccgctctaacacggatggcacgttctgcacaccgtaaagtg
gatattcttccgggagatactgtactcattgctgctacgccgatcccaggcaatgagaag
tatgtagcccgtacggtagatcagctgtatcgcatcggagccgatgtggtatacggcagt
gacattcacgtatcaggtcacggcagcgcagaagaactgaagctgatgctgaacctgatg
agaccgcagtactttctcccaattcacggggagttccggatgcttcgtcagcacgccatc
ctcgccgaacagtgtggtgtccaaccggaaaacatcttcatgctcgacaatggagatact
gtggagattcagaataaccgtgcacgctatggcccgaaagttcaatcgggtattgtcctc
atcgatggtcttggcatcggcgatgtcggcaatatcgtactgcgtgaccgtaagctgtta
tcccaggatggaattttagtcgttgtagttacattgagcaagcaaaacggaacaattctc
gcaggaccggatattatctcgcgcggctttgtatatgtccgcgagtcggaagcacttctc
gatgaagcgaatcgcattgtaggacaaacgttgcagcgctgcatggatgagaatgtgaat
gagtggtcatcactgaaaacgaatgttcgcgacgcgctgggccgcttcttgtatgagcag
actcgccgccgcccgatgatccttccgattattatggaagtgtaa
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