Aneurinibacillus uraniidurans: PO771_18660
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Entry
PO771_18660 CDS
T09970
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aud
Aneurinibacillus uraniidurans
Pathway
aud03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aud00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PO771_18660 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aud03021
]
PO771_18660 (rpoC)
03400 DNA repair and recombination proteins [BR:
aud03400
]
PO771_18660 (rpoC)
Enzymes [BR:
aud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PO771_18660 (rpoC)
Transcription machinery [BR:
aud03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PO771_18660 (rpoC)
DNA repair and recombination proteins [BR:
aud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PO771_18660 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Alpha-2-MRAP_N
AP1AR
Motif
Other DBs
NCBI-ProteinID:
WCN37730
LinkDB
All DBs
Position
complement(3698596..3702234)
Genome browser
AA seq
1212 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRSLEEVIYFASYVVTDAGETPLEKKQLLSEKEYRNYREKYGQAFTAQMGAEAIKKLLA
EIDLDKEVDSLKEELKSAQGQRRNRVIKRLEVLESFRNSGNFPDWMVLDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQCGLPKE
MALELFKPFVMKELVSKGLAHNIKSAKRKVERVHPEVWDVLEDVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGTYYLTMENKESTGEGKVFSNPNQAIAAYANGHVTLHARIAVP
PTSLGKTSFTPEQINAPLMVTTVGKLIFNEIFPPELPFINDPTKYNLQKQVPDKFFIFDK
GTNVTEFLESLPEHEAVKKGYLGTIISECFRRFGTTQTSVILDKIKANGFKFSTQAGITV
AVADIKTPEEKQQILADADAEVEVVQQQFRRGLITDNERYDRVISIWSKAKDRVTKVLMA
SLDKFNAINMMATSGARGNVSQITQLAGMRGLMANPSGRIIELPIKSNFREGLSVLEYFI
STHGARKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTDKGVEAMAIRDGKEIIED
LYDRLVGRYSFQTLRHPETGEVMVGRNELIDENLADEIIAAGIEKVTIRSVIGCRTQHGV
CKKCYGRNLATGKNVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQE
LFEARNPKGQAVITEIDGEVVDMREGKDRREVEIRGETESKVYQIPYGSRLKVAIGRKVD
IGEELTEGSIDPKEMLKVRGMRGVQYYILQEVQKVYRMQGVEINDKHVEVMIRQMLRKVR
VIDSGETDLLPGSYVEIHEFEEANKKVLWEGRQPAVARSVLLGITKASLETDSFLSAASF
QETTRVLTDAAIKGKVDRLLGLKENVIIGKLVPAGTGMNRYRNIKLQHDLMPTEENVEQS
LAEEVGLEEVSK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
ttgttagatgtcaataattttgaatatatgaagattggcctcgcatcaccggataaaatt
cgttcctggtcatacggtgaggtcaaaaaaccggaaaccattaactaccggacattaaag
ccggaaaaagaaggcttgttctgcgagaaaattttcggaccaacaaaggactgggaatgt
cactgcggaaagtacaagcgtgtacgttataaaggcgtcgtttgtgatcgttgcggcgtt
gaagttacccgcgccaaagtgcgccgggagcgtatggggcacatcgagcttgctgcccct
gtctcccacatttggtatttcaaaggaatcccgagccgtatgggccttgtgctcgatatg
tctccacgttccctggaggaagtaatctactttgcatcttacgttgtaaccgatgcaggg
gagacaccgcttgagaagaagcagcttctttccgagaaagaataccgtaactatcgcgag
aaatacggtcaggcatttactgcacagatgggtgcagaagcgatcaagaagcttctcgct
gagattgaccttgataaagaagtagattctttgaaagaagaattgaaatcagcacaagga
caacgacgcaatcgtgtaattaaacgtctcgaagtattagagtccttccgtaattccggg
aacttcccggattggatggtactcgatgtactgccagttatcccgccggaattgcgcccg
atggttcagcttgatggtggacgttttgcaacgtctgacttgaatgacctgtaccgtcgt
gtaatcaaccgaaacaaccgtcttaagcgtctgcttgatcttggcgctccagacattatc
gtgcaaaatgagaagcgcatgctgcaggaagcagtagatgcactgatcgataacggtcgc
cgtggccgtccagtaacaggaccgggtaaccgtccgctgaaatctctcagccatatgctg
aaaggtaaacagggtcgcttccgtcaaaacttgctcggtaaacgtgttgactactctggc
cgttcggttatcgtagtaggtccgcacctcaaaatgtaccagtgcggtctgccaaaagaa
atggcacttgagctgttcaagccgttcgtaatgaaagagcttgtcagcaaaggactcgca
cacaatattaaatcggcgaagcgcaaagtagagcgcgtgcatccggaagtatgggatgtt
cttgaggatgttatccgcgagcatccggttcttctgaaccgtgcccctacgctgcaccgt
cttggtattcaggcgttcgaaccgacactcgttgaaggtcgtgcgatccgtcttcacccg
ctcgtatgtacagcgtacaatgctgactttgacggtgaccagatggcggtacacgtgccg
ctttcagcagaagcgcaggcagaagctcgccttcttatgctggcagcacaaaatatcctg
aacccgaaagacggtaagccagttgttactccatctcaggatatggtacttggtacgtac
tatttgacgatggaaaataaagaatcaacaggtgaggggaaagtattctctaacccgaat
caggcgatcgctgcatatgcaaatggtcatgtaacattgcatgcccgcattgctgtaccg
ccgacaagcctgggcaaaacatcctttacaccggagcagattaatgcgccgcttatggtt
acaactgtagggaagctgatctttaatgaaatcttcccgccagagctaccgttcatcaat
gatccgacgaaatacaatctgcaaaaacaggttccggataagttctttattttcgataaa
ggaacaaacgtgacggagttcctcgaaagtctgccggaacatgaagcagtgaaaaaagga
tatctcggtacaattatctcggaatgtttccgtcgttttggcacgacacaaacatccgtt
attctcgataaaatcaaggcaaatggctttaagttctcgacacaagcggggattacagta
gctgttgctgacatcaaaacaccggaagagaagcagcagattctggctgatgccgatgca
gaagtagaagttgtgcagcagcagttccgccgtggtctcattacagataatgaacgctat
gaccgtgttattagcatctggagcaaagcgaaagaccgcgttacaaaagtgttgatggcg
tctctcgacaagttcaatgcgatcaacatgatggcaacatccggtgcccgtggtaacgta
tcgcagattacacagcttgcaggtatgcgtggtctgatggcgaatccgtctggccgtatc
atcgagcttccaatcaaatcgaacttccgtgaaggtctgtccgtactcgagtacttcatc
tcgacgcacggtgcgcgtaaaggtctcgccgataccgccctgcgtacagctgactcgggt
tatctgacacgccgtctggtagacgttgcacaggacgtaatcgttcgtgaagacgactgt
ggtacggataaaggtgtagaggcgatggcaattcgtgacggtaaagagatcatcgaagat
ctgtatgatcgtctcgtaggccgctattcgttccagacattgcgccatccagagacaggt
gaagtcatggtgggccgtaatgagctgatcgatgagaacctggctgatgaaatcattgct
gccggtatcgaaaaagtaaccattcgttcggttattggctgccgtacacagcatggcgta
tgtaaaaaatgctacggccgcaatctggctacaggtaaaaatgtggatgtgggcgaagct
gtcggtattattgcagcccagtctattggggaaccaggcacacagcttacgatgcgtaca
ttccacaccggtggggttgctggagacgacatcacgcaaggtcttccgcgtattcaggag
cttttcgaagcgcgtaatccgaaaggtcaggctgtaatcacagagatcgatggcgaagtt
gtcgacatgcgtgaaggcaaagaccgtcgtgaagtggaaatccgtggcgaaaccgaaagc
aaagtgtatcaaattccgtatggctctcgcctgaaggtggcaattggccgtaaggttgat
atcggggaagaactgacagaaggttcgattgacccgaaagaaatgctcaaagtccgtggt
atgcgtggcgttcaatactacatcctgcaggaagtacaaaaagtataccgtatgcaaggg
gtagaaattaacgacaagcacgtagaggttatgatccggcagatgctgcgtaaagttcgt
gtcatcgatagtggggaaacagatctcttaccaggctcgtacgtggaaatccatgagttt
gaagaagcgaacaagaaagtgctgtgggaaggcagacaaccggcagttgctcgttccgtt
ctgcttggtattacgaaggcttcccttgaaacagactccttcctgtcagcagcttccttc
caggagacgacgcgtgtcctgacagatgctgcgattaagggtaaagtagaccgacttctt
ggtctgaaagagaatgttatcatcggtaaacttgttccagccggtacaggtatgaaccgc
taccgcaacattaagctgcagcatgatctcatgccaacagaagaaaatgttgagcagtct
ctagcagaagaagtaggacttgaggaagtatcaaaataa
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