Pukyongia salina: C5O00_02265
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Entry
C5O00_02265 CDS
T05335
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aue
Pukyongia salina
Pathway
aue03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aue00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C5O00_02265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aue03021
]
C5O00_02265
03400 DNA repair and recombination proteins [BR:
aue03400
]
C5O00_02265
Enzymes [BR:
aue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C5O00_02265
Transcription machinery [BR:
aue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C5O00_02265
DNA repair and recombination proteins [BR:
aue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C5O00_02265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Peptidase_S80
Motif
Other DBs
NCBI-ProteinID:
AVI50053
UniProt:
A0A2S0HV55
LinkDB
All DBs
Position
complement(509328..510320)
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AA seq
330 aa
AA seq
DB search
MAVFSFQKPDKVIMINSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRIE
GVDHEFSTIAGVVEDVTEIILNLKQIRFKRQIDEIDNETVTVSVSGAQQLTAGDFQKFIS
GFQVLNPDLVVCNMDAKVNLNFEITIEKGRGYVPAEENKKANAPLGTIFTDSIYTPIKNV
KYSIENYRVEQKTDYEKLVFEIITDGSIHPKDALTEAAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSYNKNDLMKFRNFG
KKSLTELEELVNVKGLSFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatttagttttcaaaagcctgataaagttatcatgatcaactcgaccgacttc
gaggggaaattcgaatttcgccctttagagccgggttatggtcttacagttggtaacgca
ttaagaagagtactactttcctcattggaaggttttgcaattacctcggttcgtatcgaa
ggggttgaccacgaattttctaccattgccggtgttgttgaagatgttaccgagatcatc
ctgaatttaaaacaaattcgttttaaaagacagatcgatgagatcgataacgaaaccgta
acagtttctgtttctggtgcacaacaattaaccgctggagattttcagaagtttatttca
ggattccaggtattgaacccggatcttgtagtatgcaatatggatgcaaaagtgaatctg
aatttcgaaattaccattgagaaaggtagaggttatgttcctgctgaagagaataagaag
gcaaatgctcctttaggtaccattttcacagattctatctacaccccgataaaaaatgtt
aagtatagcattgagaactatcgtgtagagcagaagaccgactacgagaaactggtattc
gagatcatcacagatggatcgattcatcctaaagatgctcttacggaagctgctaaaacg
ctgatccatcactttatgttatttagtgatgagcgtattacacttgaagccgatgagatc
gcccaaaccgagacctatgatgaagaatcgcttcatatgcgccagcttcttaaaaccaaa
ttagtagatatggacctaagtgttcgtgcactaaattgtttgaaagctgccgaagttgat
acccttggtgatcttgtatcttacaataagaacgacctaatgaagtttagaaacttcgga
aagaagtccttaaccgagcttgaagaattggtaaatgtaaaaggtctgagcttcggaatg
gatctttcaaaatataaattagataaagactaa
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