Pukyongia salina: C5O00_04900
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Entry
C5O00_04900 CDS
T05335
Name
(GenBank) DNA helicase UvrD
Organism
aue
Pukyongia salina
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AVI50541
UniProt:
A0A2S0HV32
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Position
1101919..1105071
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AA seq
1050 aa
AA seq
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MTDQSSFVIFNASAGSGKTYSLVKAYLKTLLINPGSDYYKYLLAITFTNKAVAEMKQRII
TYLRHFAEENVLDDPPEMMKSLSKECNLSLQQVHQKSEDILHHLLHHYAAFSVETIDGLN
HRLIRTFARDLKIASNFEVSLEQDELLDQAVDNLMKRAGEDKQITEILVEFTLDKTDDDK
SWDISKDISRAAGILFNENELPNVERLKSWSLSRFNKIRSRLRTALSEADSQLQQIAGDT
LQLIDESGLEHEDFSGSYYPKYLKKVLDGSELRFGSKWQETLRDKPLYPTRLLKEAPHSA
ATIDELAHQFADVFDQTKTIYFRKLLIRSLLTNLTPLSVINLVQQEIDNIKEEENIVPIS
EFNRLINAEIKNQPAPYIYERLGERYRHFFIDEFQDTSSLQWENLVPLIDNSLSQEQDAN
PGSLLLVGDAKQAIYRWRGGLPELFIELYNCKNPFSVTDKTVKNLDTNWRSCAEIVNFNN
DFFTHISGYFNKKLHQELYAIGNNQKQNYREGGYVRMEFVEFERKDDAHEVYADSVSNSI
KDLLSQGYQLSDICVLTRKRMEGISLGELLMEKGIRVVSSETLLLAHSPVVKFLVNILIF
RSQPENDELKAEILLFLHQHYQVNEPLSDFLATFFPGAEIDFSATLQNYGIELRLDKTQS
LTLYETCEYVLIHCELLTRADAYVDGFMNLVFDFEQRQAMLKSSFAEYWFSKKEKEAISI
GEDVNAVRLMTIHKAKGLEFPVVLFPYADVDIYSEKMPKTWIHAETITDESEPFMINFNK
DIVEYGDEGETIYNERRATLQLDNINLLYVTLTRAVEQLHIFSKKTNPPANGELKKYSDF
FISYLQYKELWNDDSKVFEFGAPPKPDPAISTPEVKETIIEYIASPPETHDLKLATAEAS
LWETDASLKITAGTLLHDIMGKIKFSDDVEEVLDKFELESGMEGTEIEKLRSIIVKITSH
PELAHLFQPGQKVETERDIITADGQLLRPDRINFHPNGEITLIDYKTGGASDSHIEQVET
YARALRDMKLKVNNKLIIYASEDKIMINKL
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgatcaatcttcctttgtaatcttcaatgcatctgccggaagcggtaaaacttat
tcgttggtaaaggcatatttgaaaacccttttaataaatcccggttccgactattacaaa
tatctgctcgcgatcacattcacaaataaggctgttgcagaaatgaaacagcgtataata
acttatttgcgtcattttgctgaagaaaatgtgcttgacgaccctccagagatgatgaaa
agcttatcaaaggaatgtaatctctccctgcagcaggttcatcaaaaatcggaagatatc
ttacatcacttgctccatcattatgcagcttttagcgtagagaccattgatggcttaaat
cacaggttaattagaacatttgccagagacctaaagatagcgtctaattttgaggtttca
ctcgaacaggatgaattactggaccaggcggttgacaatttaatgaaacgtgccggggaa
gataaacagatcaccgaaatcctggtggaatttactttggataagacagatgacgacaaa
tcatgggatatttcaaaagacatttcgcgcgctgctggtatcctgttcaacgaaaatgaa
ttgcccaacgtggaaaggcttaaatcctggtctctctcccgcttcaacaagatccgctcc
cggttgagaacagcgctttccgaagctgattcgcaacttcaacaaattgccggcgacact
ttacaactcatcgacgaaagcggattggaacacgaggatttttctggtagctattacccc
aaatatctcaaaaaggttctcgatggaagcgagcttcgatttggctccaaatggcaggaa
acattaagagacaaaccgttgtatcccactagattgctgaaggaagctccgcattcggcg
gctaccatcgatgagctcgcacaccaattcgcagatgttttcgaccagaccaaaactatt
tatttcagaaagttattaattagatcgctgcttactaatcttactccactttctgttata
aacctggtgcaacaggaaatcgataacatcaaagaagaagaaaacattgtcccgatttcc
gaatttaacaggctgatcaatgccgagatcaagaatcagccggccccatatatttacgaa
cggcttggcgagaggtatcggcatttctttatagacgaattccaggacacttcaagtttg
caatgggaaaatctggttcccctcatcgataattccctgtctcaggaacaggatgcaaat
cccggaagcctattgctggttggagatgccaaacaagccatttatcgctggcgtggcgga
cttccggaattgttcatcgaactttataattgcaagaatcctttctccgttacagacaaa
accgttaaaaacctggatacaaattggaggagttgtgcggagatcgtcaacttcaacaac
gatttttttacccatatttcgggatatttcaacaagaaattacatcaggaattatacgct
attggtaataatcaaaagcagaattacagggagggcggttatgttcgcatggaattcgtg
gaatttgaacgtaaggatgatgctcatgaggtttatgcagatagtgtatccaattcgata
aaggatttattatcccagggttatcaattaagtgatatttgcgtgctaacccgtaagaga
atggaaggtatttcattgggagagttattaatggagaagggtattcgagtggtttcttcg
gaaacacttttactggcacactcgcctgtggtaaaattccttgtcaatattctaatattc
aggtcgcaacccgaaaatgacgaactaaaagcagaaatcctcctctttttacaccaacac
taccaggtgaacgaaccgttatccgattttcttgccactttctttccaggcgctgaaatc
gattttagtgctacgcttcagaattatggaattgaactcaggctggacaaaactcaatcc
cttaccctgtacgaaacatgcgagtatgttctcatccattgcgagctgcttaccagagca
gatgcttacgtggatggatttatgaacctggttttcgatttcgaacagcgccaggcaatg
ttaaaatcatcatttgccgaatactggttcagcaaaaaagaaaaagaagccattagtatt
ggagaagatgtgaatgccgttcgattaatgacgatccacaaagctaaagggctcgaattt
cccgtggttctgtttccttatgccgatgtggatatctattcagaaaagatgccaaaaacc
tggatccatgccgaaaccataaccgatgaatctgaaccgttcatgatcaattttaacaag
gacatcgtagaatatggcgacgagggggaaactatttacaatgaaagacgggcgaccctt
cagctggataatatcaacttgctatatgtaacacttactcgggcagtggagcaacttcat
atcttttccaaaaaaaccaacccccctgccaatggtgagttgaagaaatacagcgatttc
tttataagttatctgcaatataaagagctatggaatgacgactctaaagtttttgaattt
ggtgcaccccctaagcctgatcccgcgatatctactcccgaggtaaaagaaacaattata
gaatatatcgcttcacctcccgaaacccacgatttaaagttggcaactgcagaagcctcc
ctttgggaaacagacgcctcccttaaaataacagccggaactctactacatgacataatg
gggaagatcaaatttagcgacgacgtagaggaggttctcgataaatttgaactggaatct
ggaatggaaggcacagagatcgaaaaacttaggtctataatagtaaagatcacctctcat
ccggaactggcacacctttttcagccaggacaaaaagttgagactgaacgcgatattatt
accgcagatggacaacttcttcgtccggaccggattaattttcaccctaatggagaaatt
acgcttatcgattacaaaaccggtggggcgagtgactctcatatcgagcaggtagagacc
tatgctcgcgccttgagagatatgaaactaaaggtgaacaacaagcttattatatacgct
tccgaagataaaataatgataaataaactttaa
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