Pukyongia salina: C5O00_08695
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Entry
C5O00_08695 CDS
T05335
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aue
Pukyongia salina
Pathway
aue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C5O00_08695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aue03019
]
C5O00_08695
03016 Transfer RNA biogenesis [BR:
aue03016
]
C5O00_08695
Enzymes [BR:
aue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C5O00_08695
Messenger RNA biogenesis [BR:
aue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C5O00_08695
Transfer RNA biogenesis [BR:
aue03016
]
Prokaryotic type
tRNA degradation factors
C5O00_08695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
S1_2
KH_2
Motif
Other DBs
NCBI-ProteinID:
AVI51248
UniProt:
A0A2S0HX88
LinkDB
All DBs
Position
complement(1926926..1929133)
Genome browser
AA seq
735 aa
AA seq
DB search
MIPNVFKEVIDLGDGREISIETGKLAKQAHGSVVVRSGNCMLLCTVVSNYKQSDVDFLPL
TVDYREKFAASGRYPGGFFKREARPSDGEILTMRLVDRVLRPLFPKDYHAETQVMIQLMS
HDENVMPDAMAGLAASAAIQLSDFPFECAISEVRVGRVDGKLVINPTREQLEVSDLDMVI
GASADSVMMVEGEMKEISEEEMVEAIEFAHEAIKVQIDAQMKLADAVGRKEVREYEGEPE
DEELEKKVHSMAYDKVYAIAKAGSAKHERSEAFSAIKDEILATFTEEELEEVGELVKKYY
RKAEKEAIRDLTLNEGLRLDGRKTDEVRPIWCEVDYLPSTHGSAIFTRGETQALATVTLG
TSREANQIDMPSFEGEETFYLHYNFPPFSTGEARPIRGTSRREIGHGNLAQRALKGMIPE
DCPYTVRVVSEVLESNGSSSMATVCSGTMALMDAGVQLKKPVSGIAMGLISDGDSGKYAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKIKGLRYEILINALKQARDGRLHILNKL
TETIAQPNADVKPHAPKMVTTTIPNEFIGALIGPGGKVIQELQKETKTTIVINEDPVTEE
GIVEILGTDQAGIDAVLAKIDSITFKPEVGSVYEVKVIKILDFGAVVEYIDAPGNEVLLH
VSELAWERTENVTDVVNMGDVFDVKYFGIDSRTRKEKVSRKALLPKPEGYKERPPRRDNN
NRGRDNRSRDNKKRD
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgatacctaatgtatttaaagaggtcatagaccttggtgatggaagagaaatatccatc
gaaaccggaaaactggctaaacaggcccatggctctgtagtggttcgatccggaaattgt
atgctactatgtaccgtagtatctaattacaaacaaagtgatgtagattttctaccctta
acagtagattatcgtgagaaatttgctgcctccggtagataccctggcggtttctttaaa
agagaggcgcgtcccagcgacggagagatccttaccatgcgtttggtggaccgtgtgctt
agaccacttttcccaaaagattaccatgcggagacccaggttatgatccaacttatgtct
cacgacgaaaatgtaatgccggacgcaatggctggattggccgcatcggctgcaattcag
ttatccgattttcccttcgaatgtgctatctcggaagtacgcgtagggcgagtggacggt
aaacttgttattaatcctactcgtgagcagcttgaagtatcggacctggacatggttatc
ggagcctctgcagactctgtaatgatggttgaaggagagatgaaagagatctcggaagaa
gaaatggtggaagccatagaattcgctcatgaagccatcaaggtgcagatcgacgctcaa
atgaaattggccgatgcggtaggaagaaaagaagttcgtgaatacgaaggggaacctgaa
gatgaagaacttgaaaagaaagtacacagcatggcctacgataaagtatacgctatcgcg
aaggcaggttctgccaagcatgagcgaagcgaagctttctcagccattaaagacgaaata
ctcgcaacctttaccgaagaagaactggaagaggtgggagaactggttaagaaatattac
cgcaaagcggaaaaagaagctattcgcgaccttaccctaaacgaaggactgcgactggac
ggaagaaaaacggacgaagttcggcctatttggtgtgaagtggattatttaccctccaca
cacggatctgcgatattcacccgtggagagactcaggcattggctacggtaaccctggga
acctccagagaagccaaccagatcgatatgccgtcttttgaaggagaagaaacattctac
ctacattataacttccctcctttctctactggggaagcaagaccaattcgcgggacatcc
cgtagagagatcggtcacggaaacctggcacaacgcgcactaaagggaatgattcccgaa
gattgcccgtatacagttcgtgtagtaagtgaagttttagaatctaacggttcttcttcc
atggcaaccgtttgtagtgggaccatggcacttatggatgccggagtacaacttaaaaag
cctgtttcgggaattgcgatgggacttatttctgatggcgattccggaaaatacgctgtt
ctttccgatatccttggagatgaagatcacttaggtgatatggactttaaagttaccggt
actgccgacgggatcaccgcctgccagatggacatcaagataaaaggtttacgctatgag
atcctgatcaatgcattgaagcaagcacgtgatggtcgtttacacatcctgaacaagctt
acagagacaatcgctcagccaaacgctgatgtaaaacctcatgcacctaaaatggttacg
accactattcctaatgaatttatcggagcactaattggccccggaggaaaagtgatccag
gaacttcagaaagagaccaaaaccactatcgttatcaacgaagatcctgtgacggaagaa
ggaattgtagagatccttggaaccgaccaggctggaattgatgccgtattggccaagatc
gactctattaccttcaaacccgaggttggaagtgtttacgaagtaaaagttattaagata
ctcgatttcggagccgttgtagaatacattgacgctcctggtaacgaagtattacttcac
gtttcagaactagcttgggaacgcaccgaaaatgtaaccgatgtagtgaacatgggtgat
gtattcgatgttaaatacttcggtatcgattcgagaacccgcaaggaaaaagtatcacgt
aaagcgttactgcctaagccggaaggctataaggaaagaccgccacgtcgtgataacaac
aaccgaggacgggataaccgcagcagagataataagaaaagagattaa
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