Pukyongia salina: C5O00_09845
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Entry
C5O00_09845 CDS
T05335
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aue
Pukyongia salina
Pathway
aue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C5O00_09845 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aue03019
]
C5O00_09845 (recQ)
03400 DNA repair and recombination proteins [BR:
aue03400
]
C5O00_09845 (recQ)
Enzymes [BR:
aue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C5O00_09845 (recQ)
Messenger RNA biogenesis [BR:
aue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C5O00_09845 (recQ)
DNA repair and recombination proteins [BR:
aue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C5O00_09845 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
IFT46_B_C
Motif
Other DBs
NCBI-ProteinID:
AVI51459
UniProt:
A0A2S0HXR8
LinkDB
All DBs
Position
2158980..2161175
Genome browser
AA seq
731 aa
AA seq
DB search
MAEIDIYAALKKFFGFTKFKGLQEDVIKSILANHNTFVIMPTGGGKSLCYQLPALIKDGT
AIVVSPLIALMKNQVDALRAHSDEEGIAHVLNSSLTKTEIKKVKSDISAGITKLLYVAPE
SLTKEENVEFLNAEKVSFVAIDEAHCISEWGHDFRPEYRNLRTIIKRIGNNIPIIGLTAT
ATPKVQEDILKNLGIQDANTFKASFNRPNLYYEVRPKTKNVDADITRFVKQHEGKSGIIY
CLSRKRVEELAQTLQVNGIKAVPYHAGLDAKTRVKHQDMFLMEDADVVVATIAFGMGIDK
PDVRFVVHNDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFMSGKPVAEQEI
GHALLQEVVAFAETSISRRKFILHYFGEEFDNETGEGGDMDDNMRHPKKKHEAKEEARKL
LDVINKTNEKYKAKEIVNVMIGHVNAMIKSHRTNEQDFFGIGKDKPGEYWMALLRQLLVA
RFLRKDIETYGVIKLNDSGRDFIVNPTSFMMTEDHSFKEANDDNIEVAQKSGAAVADNNL
FNMLKAERKRVADKLSLPPFVIFQDPSLEDMALKYPITMDELSTVHGVGEGKAKKYGESF
LKLIKKYVEENDIERPDDFVVKSTGTNSALKLYIIQNVDRKLSLRDIASAKGLDMQEFIK
EMEAIVYSGTKLNIDYWIEEILDEEQQEELHEYFLEADSDKIDAAMEEFDGDYDDEELRL
YRIKFISEVAN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaaatagatatatacgcggcactgaaaaagttttttggtttcacgaaatttaaa
gggctacaggaagacgttataaaaagcatcctcgctaatcataacactttcgttattatg
cccaccggaggtggcaaatccctctgttatcaacttcccgcattaataaaggacggtact
gcaattgtagtgtctccactaattgctttaatgaagaaccaggtggatgctcttcgtgca
cattcggacgaagaggggattgcacatgttttaaattcgtctctaaccaagaccgagata
aaaaaagtgaaaagcgatatctcggccgggattacaaaactcctgtatgtagcccccgaa
tcccttaccaaagaagagaatgtagagtttttaaatgcagaaaaagtctcatttgtcgcc
atagatgaagcgcattgtattagtgagtggggccatgatttcaggccagaataccgtaat
ttgcgcaccattatcaagcgaataggcaataatatccctattattggccttaccgctact
gccactcccaaagttcaggaggatatattgaaaaatctgggaatccaggatgccaatacc
tttaaagcttcatttaaccgtcctaacttatactacgaggttcgtcccaagaccaaaaat
gtggatgccgatatcacgagattcgtcaagcaacatgaaggtaagagtggtataatttac
tgtctaagcagaaaaagagtagaagaactcgcgcaaacacttcaggtgaatggaattaag
gcggttccttaccacgcagggctggatgcaaaaaccagggtgaaacaccaggatatgttc
cttatggaagatgcagacgtggtagtggcgacgatcgcctttgggatggggatagataag
cccgacgttcgctttgtagtgcataacgatatcccaaagagtatagaaagttactaccag
gaaacgggaagagccggtagagatggaggtgaggggcattgtcttgcattctacagctac
aaggatatagagaaactggaaaaatttatgagcggtaagccggtagccgaacaggaaatt
ggtcatgcccttctgcaggaagtagtcgcctttgccgaaacttctatttcacgccgaaaa
ttcatcctgcattattttggtgaggagttcgataacgagacaggcgaagggggagatatg
gacgacaatatgcgtcaccccaagaagaaacacgaggcaaaggaagaggcaagaaaactt
ttggatgttatcaataagaccaatgagaagtacaaagccaaggagatcgtaaatgtaatg
attggccatgttaatgcaatgatcaagtcccatcgcacgaatgagcaggatttcttcgga
attggtaaagacaaaccaggtgaatactggatggcactattgagacagttgttggtggca
agatttcttcggaaggatatagagacctatggtgtgattaaattaaatgattccggccgt
gactttatagtcaatcctacgtctttcatgatgaccgaagaccattcgtttaaagaagcc
aacgacgataatattgaagtggcccagaaaagtggagctgccgtagcagacaataatctg
tttaatatgttgaaggccgaacgtaaacgtgtagccgataaactcagtctcccgcctttt
gtgatttttcaggatccttccctggaggatatggcgctaaaatatcctattactatggac
gagctctccaccgttcatggagtaggcgaggggaaggccaagaagtacggcgaatctttt
ctcaaactcatcaaaaaatacgtggaagagaatgatattgagaggcccgatgatttcgtc
gtgaagtccaccggtaccaatagcgctcttaaattatatatcattcagaatgtagaccga
aaattatccctcagggatattgcttcggccaaaggcctggatatgcaagaattcattaag
gagatggaagcgatcgtgtatagcggaaccaagctaaatatcgattactggatagaagag
atcctcgatgaagaacagcaggaagagctacacgaatattttctcgaggcagattcagac
aagattgatgctgctatggaagaattcgatggcgactacgacgatgaagaactgcggctc
tatcgcatcaagtttattagcgaggtggcaaattaa
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