Pukyongia salina: C5O00_10475
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Entry
C5O00_10475 CDS
T05335
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aue
Pukyongia salina
Pathway
aue03030
DNA replication
aue03430
Mismatch repair
aue03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C5O00_10475
03430 Mismatch repair
C5O00_10475
03440 Homologous recombination
C5O00_10475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aue03032
]
C5O00_10475
03400 DNA repair and recombination proteins [BR:
aue03400
]
C5O00_10475
Enzymes [BR:
aue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C5O00_10475
DNA replication proteins [BR:
aue03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C5O00_10475
DNA repair and recombination proteins [BR:
aue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C5O00_10475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
Rv2179c-like
DUF7508
ORC3_ins
DEDDh_C
DNA_pol_A_exo1
T5orf172
Motif
Other DBs
NCBI-ProteinID:
AVI51565
UniProt:
A0A2S0HY68
LinkDB
All DBs
Position
complement(2295738..2297117)
Genome browser
AA seq
459 aa
AA seq
DB search
MYAILDIETTGGKYNEEGITEIAIYKFDGEKIVDQFSSLINPERRIQPFVVNLTGINAEM
LRNAPKFYEVAKRIIEITEDAVLVAHNAQFDNRILTTEFDRLGYNFEKDTLCTVELAKKL
IPGLPSYSLGKLVRSLGIPLSDRHRAQGDAKATVALFKMLLAKDASKEIIQKCVRKDPKR
QLEPKLLEMIENAPNETGVYYMHREDGTIIYIGKSKNIKKRLVQHFTNDSKKSKRIQLEV
AAVTYEKTGNDLIAQLKESREIKQNKPIYNRALRRTFFSYQLTSFTDKNGYINLSIEKAN
HKKEAILTYSNYQQAKSSLYRITEENGLCQKLTGLYKSDSSCFLYSIKECNGACIHEESA
AQYNERVQAFIEKNSYDNKHMLIIDRGRDVDERSVVLIENGQYRGYGFYNLNYQINNIEI
LRTIINPVNNDRDSQHIIQNYLRKNKVINIVKLPEEATI
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgattttagatatagaaaccactggaggtaagtacaatgaagaaggaatcaca
gaaatcgctatttacaaatttgatggagaaaagatcgtagatcagttttcaagcctgatc
aacccggaaagaaggatacagccttttgtagttaacttaacgggtattaatgctgaaatg
cttcggaatgcacctaaattctacgaggtcgctaaacgaataattgagatcacagaggat
gccgtcctggtagcacataatgcacaatttgataaccgaatccttaccaccgaattcgac
cggcttggctataattttgaaaaagatacgctgtgcactgtagaactggctaaaaaactt
atcccgggacttccctcctatagcctgggaaaattggttcgttccttgggaattccacta
agcgaccgacatagggctcagggcgacgcaaaagcaactgtcgcgctcttcaaaatgtta
ctggctaaggacgcttcaaaagagatcattcagaaatgtgtgcggaaggacccaaaacga
cagttggaacccaaactactcgagatgatcgagaacgccccaaacgaaacaggtgtttat
tatatgcaccgggaggatggaacaataatttatattggcaagagtaagaatataaaaaag
cgattggtacagcattttaccaacgactcgaaaaaatcaaaaagaatacaactcgaggtc
gccgctgtaacctacgaaaaaaccgggaacgatcttattgcccaattaaaggaaagccgg
gagatcaagcaaaataaacccatttataacagggcgcttcgccgtaccttttttagttat
caactcacttcctttacagacaagaatgggtatataaatttaagcatagaaaaggcaaat
cataaaaaagaagcgatcctcacctatagtaattaccagcaagcgaaatcttcactatac
cgaattacagaggagaatggtctgtgccagaaacttacgggcttatacaaatctgatagc
tcctgttttctttattctatcaaagaatgtaacggtgcctgtatacatgaggaatcagcg
gctcaatacaatgaacgtgtccaggcctttatcgaaaagaacagctatgataacaagcac
atgctcataatcgatcgtggaagggacgtcgatgagcgctcggtagttttgatagaaaac
ggtcagtacagaggctatggtttctacaatcttaattatcagatcaacaacatcgaaata
cttcgaactatcatcaatccggtgaataacgaccgagattctcaacatattattcagaat
tatctcagaaagaataaggtgattaatattgtaaaattaccagaggaagcgaccatataa
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