Pukyongia salina: C5O00_10795
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Entry
C5O00_10795 CDS
T05335
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
aue
Pukyongia salina
Pathway
aue03030
DNA replication
aue03430
Mismatch repair
aue03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C5O00_10795 (holA)
03430 Mismatch repair
C5O00_10795 (holA)
03440 Homologous recombination
C5O00_10795 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aue03032
]
C5O00_10795 (holA)
03400 DNA repair and recombination proteins [BR:
aue03400
]
C5O00_10795 (holA)
Enzymes [BR:
aue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C5O00_10795 (holA)
DNA replication proteins [BR:
aue03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C5O00_10795 (holA)
DNA repair and recombination proteins [BR:
aue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C5O00_10795 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
Glyco_transf_25
Motif
Other DBs
NCBI-ProteinID:
AVI52413
UniProt:
A0A2S0I164
LinkDB
All DBs
Position
2368891..2369889
Genome browser
AA seq
332 aa
AA seq
DB search
MEKAKQIIKDIQQGNIAPIYFLMGEEPYYIDGISAFIEDSILSEEEKSFNQVVLYGRDVS
IDDIISNAKRYPMMAERQVVIVKEAQDLSRTIENLLPYAENPQPSTVLVICYKYKKLDAR
KKLSKTIQKNGVLFESKKLYENQIPDWIRRVLAGKGYTITPKAAQMLTEFLGNDLGKVNN
ELEKLQLILPQGSQITPQLVEENIGISKDFNNFELQNAIGSRNITKAFTIVQYFGQNPKN
HPLVMTVALLYSFFSKLLKYHALKNPAHAARELGVSPYFIKDYQTAALNYPMKKVSKIIS
DIREIDMKSKGVGGANIPQGDLLKELLVKIFD
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atagagaaagccaagcagataatcaaagatattcaacaaggtaatatagctcccatttat
tttttaatgggggaagagccatattatattgatggaattagtgcgtttatagaggatagc
attctttctgaagaagagaaaagtttcaaccaggtggttctatatgggagggatgtaagc
atagacgatattataagtaatgccaagcgatatccaatgatggccgaacgccaggtggtc
attgtaaaagaagctcaggacctgtcaagaactatagaaaacctgcttccttatgccgaa
aatccacaacctagtactgtgttggtgatttgttataaatataaaaagctcgatgctcga
aaaaagctctccaaaacgatccagaaaaatggagtactattcgagagtaagaaattatac
gaaaaccagatcccggattggattagaagggtcctcgcaggcaaaggatacacaattact
cccaaggcggcccaaatgcttaccgaattccttggtaacgaccttggaaaggtaaataac
gaactggaaaaacttcagctcatcttacctcagggatcacagatcaccccccagttagta
gaagagaatatcgggataagtaaggactttaacaacttcgagttacaaaatgccattggg
tccagaaacatcaccaaagcctttactattgtacagtatttcggtcaaaatccaaaaaat
catccattggtaatgaccgtggccttactttatagtttcttttcaaaattgctgaagtat
cacgccctgaagaatcctgcccatgctgctcgtgaattgggtgtgagcccttatttcata
aaagattatcaaacggcagctcttaattaccccatgaaaaaggtaagtaagatcataagc
gatattcgggagatcgatatgaaaagtaaaggggtagggggagccaatattccgcaggga
gatttactgaaggaactgctggttaagatttttgactaa
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