KEGG   Acinetobacter ursingii: URS_0252
Entry
URS_0252          CDS       T06299                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
aug  Acinetobacter ursingii
Pathway
aug03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aug00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    URS_0252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aug03021]
    URS_0252
   03019 Messenger RNA biogenesis [BR:aug03019]
    URS_0252
Transcription machinery [BR:aug03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     URS_0252
Messenger RNA biogenesis [BR:aug03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     URS_0252
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N Sulfotransfer_1 NACHT AAA_22 AAA_25 S1CSD-TOTE-2 OB_RNB AAA GpA_ATPase
Other DBs
NCBI-ProteinID: BBF76300
LinkDB
Position
1:257477..258745
AA seq 422 aa
MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIFGDGVLEILSD
GFGFLRSAAGSYLAGPDDIYVSPSQIRRFNLRTGDTITGTIRPPKEGERYFALLKVNQIN
YDTPENSRNKILFENLTPLFPTEQLVMELGNGTTEDLTSRVVDLIAPIGKGQRSIIVAPP
KAGKTMLLQNIAQSIVRNNPEVFLIVLLIDERPEEVTEMERTVRGEVVASTFDESPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLTIISTALIETGSKMDDVIYEEFKGTGNQEITLDRRIAEKRVFPAMNI
KKSGTRREERLMDEDNLRKVWILRKLLHPMDELAAMEFLLDRMKETKTNDDFFDQMKRKA
AN
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaacttaaccgaactcaagaaaaaaccgattggcgaactcattaagattgctgagttt
atgggccttgaaggaatggctcgtaaccgtaagcaagatattatttttgccatcttaaaa
cgccacgccatgaacggtgaagaaatctttggtgatggtgttctcgaaatcctctctgat
ggttttggttttttacgttcagctgcgggttcttaccttgcaggtccagacgacatctat
gtcagcccttcgcaaattcgtcgttttaatttgcgcacaggtgacacgattacaggaacc
attcgcccaccaaaagaaggtgaacgttattttgcactgttaaaagtcaaccaaattaac
tacgacactcctgaaaactctcgtaataaaatccttttcgaaaacttaacgccacttttc
ccaaccgaacaactggtcatggagcttggtaacggtaccactgaagatttaacctcgcgt
gttgtagaccttattgcgccgattggtaaaggtcagcgctccatcattgttgccccacct
aaagcgggtaaaaccatgttattacaaaacatcgcacagtcgattgttcgtaataatcca
gaggttttcctgatcgttctactcattgacgaacgtccagaagaagtcactgaaatggaa
cgtaccgttcgcggtgaagtcgtggcttccacttttgatgaatctcctgcacgtcatgtt
caagttgccgaaatggtgattgagaaggcgaaacgtctggttgagcacaaaaaagatgtc
gtgattctactcgactcgattactcgtctggctcgcgcctataacacggtgattccatca
tcaggcaaagtgttaacgggtggtgtcgatgcgcatgctctcgaacgtccaaaacgtttc
tttggtgcagcacgtaacattgaggaaggcggttcactgaccatcatttcaactgcattg
atcgaaactggcagtaagatggatgatgtgatctacgaagaattcaaaggtacaggtaac
caggaaattacactggatcgtcgtattgccgaaaaacgcgtcttccctgcaatgaatatc
aagaaatctggtacgcgtcgtgaagagcgtttgatggatgaagataacctacgtaaagtc
tggattctacgcaaactactgcatccaatggatgagcttgctgcaatggaattcttactt
gatcgtatgaaagaaaccaaaaccaatgatgatttcttcgatcagatgaaacgaaaagct
gcgaattaa

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