Acinetobacter ursingii: URS_0465
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Entry
URS_0465 CDS
T06299
Name
(GenBank) RtcB protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
aug
Acinetobacter ursingii
Brite
KEGG Orthology (KO) [BR:
aug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aug03016
]
URS_0465
Enzymes [BR:
aug01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
URS_0465
Transfer RNA biogenesis [BR:
aug03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
URS_0465
Prokaryotic type
tRNA splicing ligases
URS_0465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
BBF76512
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All DBs
Position
1:473333..474538
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AA seq
401 aa
AA seq
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MSIQKILNADAAYGVPVKIFTNDIDQDSIEQLTKMAQLQFIHSHIAVMPDVHVGKGATVG
SVIPTKHAIIPAAVGVDIGCGMNAIRLNLKSSQLPDNLSSLRHAIERKVPVGFDLHKQVK
AKASTLTPLDKRLQPIISKHPGLVRMLRKFDMTWQKQLGTLGGGNHFIELCLDENQDVWI
MLHSGSRGLGNVIGTYFIELAKKEAQHRFGHVPDKDLSYFAEGSASFDDYVEAVEWAQAY
AYENRREMMRLILEAIRPLLPSFQLTKEAINCHHNYVSQEQHDGENLLITRKGAIRAGKD
ELGIIPGSMGARSYIVRGKGHPDSFCSCSHGAGRKMSRNKAKHLFNQQDLIQQTQGIECR
KDVGVIDEIPAAYKDIDQVMAHQSDLIEVVHTLKQVLCIKG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagcatacaaaaaattttaaatgcagatgccgcttatggagttcctgtaaagatcttt
acgaacgatatcgatcaagacagtattgaacaactcactaaaatggcgcaattgcaattt
attcattcccacatagcagtcatgccagacgtgcatgttgggaaaggagccaccgttggc
agtgtcattccgaccaaacatgcgattatacccgctgcggtcggcgtagatattggctgt
ggaatgaatgcgatacgtttaaacctcaaaagcagtcaacttccagacaatctttcaagc
ttacgtcatgcgattgaaagaaaagtccctgttggttttgatttacacaaacaagtgaaa
gccaaagcttcgaccctgacaccgctggataaacggctccaaccgattatcagcaaacat
cctggtttggttcgaatgctgcgaaagtttgatatgacttggcaaaaacaactcggaact
ttagggggcggcaaccactttattgaactttgtctggatgaaaatcaggacgtctggatc
atgttacattcagggagtcgtggtttaggcaatgtcattggtacttattttattgaactg
gcaaaaaaagaagcccaacaccgctttggtcatgttcctgacaaagacttgagctacttt
gccgaaggctctgcaagctttgacgattatgttgaagcggttgagtgggcacaggcgtat
gcctatgaaaaccgtcgtgagatgatgcgtttaattttagaggcgattcgcccactatta
ccttcatttcagttgaccaaagaagcaattaattgccaccataattatgtcagtcaggaa
caacatgatggcgaaaatttattaattacacgaaagggtgccatccgagctggtaaagat
gaacttggaatcattccaggttcgatgggtgcgcgttcttatattgtacgtggcaaaggt
catcccgactccttttgctcttgctcacatggtgcaggacgtaaaatgagccgtaataaa
gccaagcatctgtttaatcaacaagatttgattcagcaaacgcaaggcattgaatgccgt
aaagatgtaggtgtgattgatgaaattccagcagcgtataaagacattgatcaagtcatg
gctcatcagtcagatttgatagaagtcgtacatacgcttaaacaagtcctttgtattaaa
ggataa
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