Acinetobacter ursingii: URS_1439
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Entry
URS_1439 CDS
T06299
Name
(GenBank) exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
aug
Acinetobacter ursingii
Pathway
aug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
URS_1439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aug03400
]
URS_1439
Enzymes [BR:
aug01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
URS_1439
DNA repair and recombination proteins [BR:
aug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
URS_1439
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DUF2972
AAA_25
UMAG_10076_C
Biotin_carb_C
Motif
Other DBs
NCBI-ProteinID:
BBF77446
LinkDB
All DBs
Position
1:1466401..1470087
Genome browser
AA seq
1228 aa
AA seq
DB search
MISSHSAVSYQPITDIEFSGLHLIEASAGTGKTFTLSSLMVRIFLEKYLPNQVIATTFTR
AAAAELKTRIRLRLQDMYRDLQAYRGLTEQEVLAQATKQSDPLMKHVLCHFATRMDYACE
RLKLVLDQLDELFVGTLDSFSQKLLREFAFESGKIERAQITDDAKRYTRQLIHDVLREWI
QAQPQALIDGLYNIGALKSVDAFVDVVENSLNFTSAQFQSAPMPVLNWEVLTQFQSFIQH
SDLSDLHAYYELDGEYYTCINGTSFRNGAFHDLFTVHLPQLAQVLAGENVLQIFDAPLAS
AREAAFKFLDKFEQGKIFKKCPAEVSDGFYHHPLIQQWVEIIRHLGILQDQLEQLQQYLK
AYLCLEVKQRLPQLLQQKGETTFSQQIRTLAEALQGEQGQRFAIFVQARYPLILVDEFQD
TNQDQDDMLASIWRHPQRYQKGCMIMVGDRKQAIYGFRGGDMLTFLKAHQDIKAKQGREY
QLSFNHRSVKELVEVVDHLFQQQPDFGEQVIYDPIQAGSRPHPALIDQGQPNVTPLRWLM
LSDKSKEAEQVAWKIRALLNQSQTGDLYLQAEQAQLLIEDDIAVLSRNHAGLDAVQSALE
YLGIRVHRPSRKSVFDHPIAQDVAALLTAVLHPYDEAKIKRALLSRLIGLNLKQLVEQEQ
TTEGLSAYIAAFDHLRELWLQQGFLSAWQACMNQFNVWQNLVAQHSKDHERDVVNLRHLS
EILSQHSEHYQGVQNLYHWYLKQLQAPSQRDWEMERKLSSDAGIQLMTIHQSKGLEFKIV
FLLGADKPFKDQNTALNFSTIDVAHPENGQVTTQRVIAIQDKQRLSSEALAQNEQRSRAE
QNRLWYVALTRASHRVYAMMQDQQQKSLDALAFWKYQHGNFQHPFSFDEQELAECPPPFK
AKITEPKLNLQAQPLPTQRFYARGKTSFSYLAQHLKPHQIASDQLAAQDQKLEQAADEQD
HLIVERSTLTQPIHWIQHNFPKGTLAGNFLHEIFEHVDFQDQSEWIAEIRRRFKNDYGSL
WDQLYSIYQQDFPENEQNENQLYQWLADWLKQVLTTPLHQGFQLHQLQAGQFLSECPFYL
ALSDRVLAMRRIQQLFLEYQIEMPDFLEAHAARYLNGSIDLMYFDGSQFHIADYKSNYLG
KDFNDYRADAIQQNMRQSSYWLQAALYLVALHRYLKVKLQHYQIEQHLGGATYLYLRGMN
GQADQGYYYWRPDTEFILRLDAILGYFD
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
ttgatctcatctcactcagccgtgtcttatcaaccgattaccgatattgaattctcaggt
ttacatctaatcgaggcttccgcaggcacaggaaaaacctttactttgtcgagtttgatg
gtacgtatttttttggaaaaatatttacccaatcaggtcatcgcgactacatttacccgt
gcagcagcagcagagttgaaaactcgaatacggctgcgtttgcaagacatgtatcgtgat
ctacaagcctatcgtggtttgacggaacaagaggttttagcgcaagccacaaagcaatct
gatcctttaatgaagcatgtattgtgtcattttgcgacacgaatggactatgcctgtgag
cgtttaaaactagtgctggatcaactggatgaactctttgtcgggactctggacagtttt
agtcaaaaactattacgcgaatttgcatttgaaagcggcaaaatcgagcgtgcgcaaatt
acggatgatgccaaacgttatacccgccaactcattcatgatgtgctacgtgaatggatt
caggcacaaccgcaagcattgatcgatggtctatataatattggcgctttaaaaagtgtc
gatgcgtttgtggatgtggttgaaaattcgttgaactttacttcagcacaatttcagtcg
gcaccaatgcctgtattgaattgggaggtgttgactcaatttcaatcttttatacagcat
tcggatttgagtgacctacatgcgtattacgagcttgatggcgaatactatacctgcatc
aatggcacctcatttcgaaatggcgcatttcatgatttatttaccgtgcatttaccccag
ctggctcaggtcttggctggtgaaaatgtattacagatttttgatgctccactcgccagc
gcgcgtgaggctgcatttaaatttctggataaatttgaacagggcaaaatatttaaaaaa
tgtcctgccgaggtgagcgatggattctatcatcatccactaattcagcagtgggtggag
atcattcgtcatttaggcatccttcaagatcagcttgaacaattacaacagtatttaaaa
gcctatctgtgtctggaggtcaaacagcgtttaccccaactccttcaacaaaagggcgaa
accaccttttcacagcagattcgtacccttgcggaagcattacaaggcgagcagggacaa
cgctttgcgatttttgtgcaggctcgttatcccttgattttggtggatgagtttcaggat
accaatcaagatcaagatgatatgttggccagcatttggcgacatccgcagcgttatcaa
aaaggctgcatgattatggtgggagaccgtaaacaggcgatttatggctttcgcggcggt
gatatgctgacttttctcaaggcgcatcaagatattaaagccaagcaaggacgagaatat
cagctcagttttaatcaccgttcggtcaaggagttggtggaagttgttgatcatcttttt
caacagcaacctgattttggcgagcaagttatttatgacccgattcaggcaggctcgcgt
ccgcatccagccttgatcgatcaaggtcagcctaatgttacacctttacgttggttgatg
ctgagtgataaatctaaagaggctgaacaggtggcatggaaaatccgtgcgctgctcaat
cagtcacagacgggtgatttatatttgcaagccgagcaagcacagctcttaatcgaagat
gatattgcagtgctgtctagaaatcatgctggactcgatgcagtacagtctgctttggaa
tatttaggcattcgggttcatcgaccgtcacgaaaaagcgtatttgatcatccgatagca
caagatgttgctgctttactgaccgcagttttgcatccctacgatgaagccaaaattaaa
cgtgcattattaagtcgtctcattggactgaatttaaagcaactggttgagcaggaacag
actacagaaggtttgagtgcttatatcgcggcctttgatcatttgcgtgagctgtggttg
caacagggctttctaagcgcatggcaagcctgcatgaaccagtttaacgtctggcaaaat
ctggtggcgcagcacagtaaagaccatgaacgtgatgtggtgaatttacggcatttgagt
gaaattttaagtcagcacagtgaacattatcagggtgtgcaaaatctctatcactggtat
ttaaagcagctccaagctccaagccagcgtgattgggaaatggagcgtaaactttccagt
gatgcaggcattcaactgatgaccattcatcagtccaaaggtctggagtttaagatcgta
tttttattgggggcagataaaccttttaaagatcaaaatacggctttaaatttttcaact
atagatgttgcccatcctgaaaatggacaagtgaccacacagcgcgtgatcgccattcag
gataaacaacgcttaagttctgaagccttggcgcaaaatgaacaacgcagtcgtgccgaa
caaaaccgactctggtatgtggcgctgactcgtgccagccatcgcgtctatgccatgatg
caggatcagcagcaaaaatcactggatgcattggcattctggaaatatcaacacgggaat
tttcagcatccatttagttttgatgaacaagagttggcagaatgtccaccgccgtttaaa
gcgaaaatcaccgagccaaaactcaacttacaagcacagcctttgccaacacagcgtttt
tatgcacgtggcaaaaccagttttagctatctggcgcaacacttaaaaccgcatcaaatc
gccagcgatcagttggctgcacaggatcaaaaactggagcaagccgcagatgagcaagat
catttaattgttgaaagatccacgctcacacagcccattcactggattcagcacaatttt
cctaaaggcacattggcagggaattttttgcatgagatttttgaacatgtcgattttcag
gatcaaagtgaatggattgctgaaattcgtcggcgttttaaaaacgattatggtagttta
tgggatcagctttatagcatctatcaacaggatttccctgaaaacgaacagaatgagaat
cagctttatcaatggttagcagattggttaaagcaagtattaaccacgccattacatcaa
ggttttcagttacatcaactgcaagcaggtcaatttttatctgaatgtcctttttacttg
gcattgtcggatcgtgtactggcgatgcgtcgtattcagcaattatttttggaatatcag
atcgaaatgcctgattttctggaggcacacgctgcgcgttacttaaatggttcgattgat
ttgatgtattttgatggttcacagtttcatattgccgattataagagtaattatctgggc
aaagacttcaacgattatcgggcggatgcaattcagcagaatatgcgccagtccagttat
tggttacaggctgcgttgtatttggtagcgttgcatcgttatttaaaagtgaaattgcaa
cattatcagattgagcagcatttggggggcgcaacctatttgtatttacgtggcatgaat
ggacaagctgatcagggatattattactggcgacctgacaccgagtttattttgcgtctg
gatgcaattttaggctactttgattga
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integrated database retrieval system
