Acinetobacter ursingii: URS_1444
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Entry
URS_1444 CDS
T06299
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aug
Acinetobacter ursingii
Pathway
aug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
URS_1444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aug03019
]
URS_1444
03016 Transfer RNA biogenesis [BR:
aug03016
]
URS_1444
Enzymes [BR:
aug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
URS_1444
Messenger RNA biogenesis [BR:
aug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
URS_1444
Transfer RNA biogenesis [BR:
aug03016
]
Prokaryotic type
tRNA degradation factors
URS_1444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_RRP5
S1_2
KH_PNO1_2nd
KH_N4BP1_2nd
KH_DEAH11_2nd
Motif
Other DBs
NCBI-ProteinID:
BBF77451
LinkDB
All DBs
Position
1:1474691..1476784
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AA seq
697 aa
AA seq
DB search
MSMFNIVRKEFQFGQHQVVLETGRVARQANTVLITMGGVTVLVAVVAQPKAKAGQDFFPL
TVNYQEKQYAAGRIPGGYGKREGRASEAETLISRLIDRPIRPLFPEGYFNEIQVTATVVS
SDKTMDADIAAMLGTSAALSIAGTPFRGPIGGARVGLINGEYVLNPNFEQLAQSDLDLVV
AGTESAVLMVESEAKELSEDQMLGAVLFGHDEMQIAIQAIKEFAAAAGAVESTWVAPSKN
ETLLEQLKAAFESKISEAYTIAVKQDRYAALDALYAEAVAQFVPENDETGIADEVNELFE
DLKYRTVRDNILSGKPRIDGRDTKTVRGIDVQVGVLERAHGSALFTRGETQALVTTTLGN
TRDALMVDTLSGTKTDNFMLHYNFPAYSVGETGRESGPKRREIGHGRLARRGVQAVLPAA
DRFPYVIRIVSDITESNGSSSMASVCGASLSLMDAGVPLKAPVAGIAMGLVKEGERFAVL
SDILGDEDHLGDMDFKVAGSANGITALQMDIKIEGITEEIMEVALNQAYAGRMHILNEMN
KVISRARPEISMFAPTFEVITINPDKIRDVIGKGGATIRQITEETKAAIDIEDNGTVRVF
GESKAAARAAIAKIQALTAEVEPGKIYDGKVIRIVEFGAFVNIMPGTDGLLHISQISNER
VANVTDVLKEGQEVKVQVADVDNRGRIKLTMKDIEQA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtttaatatcgttcgtaaagaatttcaattcggtcagcatcaagttgtttta
gaaacaggtcgtgtggcacgtcaagcaaatactgtattaatcaccatgggcggtgtaacg
gtacttgttgctgtagttgctcaacctaaagcaaaagccggtcaagactttttcccactg
actgtaaactatcaagaaaaacaatatgctgctggtcgtattccaggtggttatggcaag
cgtgaaggacgtgcatctgaagcagaaactttgatttctcgtttgattgaccgtccaatt
cgcccattgttcccagaaggttacttcaacgaaattcaggtgactgcaactgttgtatct
tctgataaaactatggatgctgatattgcagcaatgttgggtacatctgctgcattgtcg
attgcgggtacgccattccgtggtccaatcggtggtgcgcgtgttggtctgatcaatggc
gaatatgttttaaacccaaactttgagcaattggctcagtctgatcttgaccttgtggtt
gcaggtacagaatcagcagtcctcatggttgaatctgaagccaaagagctttcagaagat
caaatgctgggtgcagttctgtttggtcatgacgaaatgcaaatcgcgattcaagcgatt
aaagagtttgccgcagcagccggtgcggttgagtcaacttgggttgccccaagcaaaaat
gaaacgttacttgagcaattaaaagcggcgtttgaaagcaaaatttctgaagcttatacg
attgcggtgaaacaagatcgttacgcagcacttgatgcattatatgcagaagcggttgct
caatttgttcctgaaaatgacgaaacaggcattgcagacgaagtcaacgagttgtttgaa
gatctgaaataccgtacggtgcgtgacaatatcctgtcaggtaagccgcgtatcgatggt
cgtgatactaaaaccgttcgtggaatcgatgtacaagtgggtgtactagaacgtgctcat
ggttcagcattgtttacacgtggtgaaactcaggcattggtcaccaccactttgggtaat
acccgtgatgcgttgatggttgacactctttctggtactaaaactgacaacttcatgttg
cactataacttccctgcatattctgtgggtgaaacgggccgtgaatctggtccgaaacgc
cgtgaaattggtcatggtcgcttggctcgtcgtggtgttcaagcagttcttcctgctgct
gaccgcttcccgtacgtgatccgtattgtatctgacattactgaatcaaatggttcatct
tcaatggcttctgtttgtggtgcttcattatcattgatggatgcgggtgttccactgaaa
gcaccagttgcgggtatcgcgatgggtctagtgaaagaaggcgagcgtttcgctgttctt
tcagacatcttgggtgatgaagatcatttaggtgatatggactttaaagtggcaggttct
gccaacggtattactgcgctacaaatggacatcaagatcgaagggattaccgaagagatc
atggaagttgcattgaatcaggcttatgcaggtcgtatgcacatcctgaatgaaatgaat
aaagtaatttctcgtgcacgtccagaaatttcaatgtttgcaccaacctttgaagtgatc
acaattaatccagacaagatccgtgatgtcattggtaaaggtggcgcgaccattcgtcaa
attactgaagaaaccaaagcggcgattgatatcgaagacaatggtactgtgcgcgtattt
ggtgaatctaaagcggctgcacgtgctgccattgccaaaattcaagcgttaacggctgaa
gttgagccaggcaaaatctatgacggtaaagtgattcgtatcgttgaatttggtgcgttt
gtgaacattatgccgggtacggatggtttgcttcacatttctcaaatttcaaatgaacgt
gttgccaatgtgactgatgtattgaaagaaggtcaggaagtcaaagttcaggtggctgat
gtcgataaccgtggccgtattaaactgaccatgaaagacattgaacaggcttaa
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