Acinetobacter ursingii: URS_1495
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Entry
URS_1495 CDS
T06299
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
aug
Acinetobacter ursingii
Pathway
aug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
URS_1495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aug03019
]
URS_1495
03009 Ribosome biogenesis [BR:
aug03009
]
URS_1495
Enzymes [BR:
aug01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
URS_1495
Messenger RNA biogenesis [BR:
aug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
URS_1495
Ribosome biogenesis [BR:
aug03009
]
Prokaryotic type
rRNA processing factors
URS_1495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
BBF77500
LinkDB
All DBs
Position
1:complement(1525470..1528877)
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AA seq
1135 aa
AA seq
DB search
MKRMLINATHAEEVRVALITGNRLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY
GAQRQGFLSMREIANTYFKADPRQTSNIRELITEGTELLVQVEKEERGNKGAALSTFISL
AGRYLVLMPNNPKGGGISRQISGSVREELKEMLASLNIPRGMSVIVRTAGIGRSQEELQL
DLQHLLDLWNQIQNTANSGPSPMLVHQEAGVVTRAIRDYLRDDVSEILIDSEQAYNEAYN
FVKAVMPRQLDKLKTYTLNEPLFAHFGIESQIQTAYEREVKLPSGGSIVIDQTEALVSID
INSAKSTRGHDVEETALNTNLEAAEEIARQLRLRDIGGLVVIDFIDMTKDRNQRMVEAKL
REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI
MRKVEEIALRERHGEVQVEVPVEIAAFLLNEKRHSLVYLEQTSGVRVTVLPHPHLETPHY
EIQYNPEGFAPSSYERTEATRSSEKELGYESSEWHLEEADHSHAAVPVQSEQNKRKATAQ
TPAPAAQTAVAPKAASPCAWLENLFVQKQAQTVDQSRSAQNAASAIEQMVNGGAVSRGQF
GQVNVASVTETVTVAASGNNAYMSQTPVAKQEARDNTTERDEKNNRPNNNKKRKHKDQRE
RTEREQPQQREPNQEQQPAQVHEEVVQLSRHEQRELKRQQKRQQPQEQNHSQNQAQTEVH
AEEAVPRRDRNNQQRPNRPHRNRDQSVLDNAHQTTNKPVANDAKQVTVDVVDAPRNEMMT
TALVINVDQAQSEIVALNPQVEPQESPKQAENPVANPVEEVVVTEAQLSEAATKSTEVAT
EQTRSQVKRASNDPRMRRRQQREAQQSKVAAPKVQPSQIPELANYTLGSLIRHIYGEDCT
VLIEQFGLVPTFNRALIKFTEQYASSQVAEAKTVEEDKKPVTRDAQLPSKKALEESEAAE
VLPLTPPETPATRVANDPRERRRLAKLAAEQAHEQAKQAQAVPKAETGNEQGAEIEAVAS
ETVASATEAPETVVLPEQSLETATPVSKQKATAPTETAQPEVKAELEKVSTAAQTEPVQA
ELNEVTASEQASEVKANDETTEKSATQETAADADKPSRPRRPRGRPPKKASTTTE
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtatgttgattaatgcaacccatgctgaagaagtacgcgttgcacttatcact
ggtaatcgtctttacgattttgacttagaaaatcgtacccgcgaacaaaaaaaatctaac
atctacaaaggtcatgtgactcgcgtagagccttctctagaagccgtatttgttgaatat
ggtgcgcagcgtcagggctttttgtccatgcgcgaaatcgccaatacttactttaaggct
gacccacgtcaaacttcaaatatccgcgaactgattaccgaaggtactgagcttttggta
caagtggaaaaagaagagcgcggcaataaaggtgctgcgctttccacctttatttcactt
gcaggtcgttatctggtcctcatgccaaataatcctaaaggtggcggtattagccgtcaa
atttcgggttcagttcgtgaagaattgaaagaaatgttggcatcactcaatattcctcgc
ggaatgagcgtgattgtacgtactgcggggattggtcgttcacaagaagaattacagctt
gacctgcaacatttgctcgacttatggaatcaaatccaaaacacagcaaactcgggtcca
tctccgatgttggtacatcaagaagctggcgtagtgactcgcgcgattcgtgattacttg
cgtgatgatgtctctgaaatcctgattgatagcgaacaggcctataacgaagcttataac
tttgtaaaagcagtgatgccgcgtcaattagacaagctaaaaacctatacattaaatgag
cctttgtttgctcactttggtattgaaagtcaaattcaaaccgcttatgaacgtgaagtg
aagcttccatctggtggttcaattgtgattgaccagactgaagcattggtttcaattgat
attaactcggctaaatcaacgcgtggtcatgatgttgaagaaactgcactgaataccaac
cttgaagcagctgaagaaattgcacgtcaattgcgtttgcgtgatattggtggtttggta
gtgatcgatttcatcgacatgaccaaagaccgcaaccagcgtatggtcgaagccaaattg
cgtgaagcaacccaaagtgatcgtgcacgtatccagtttggtcagctttcacgttttggc
ttgatggaaatgagccgccagcgtttacgtccatctttagaagaagccacaggttatgtc
tgcccgcgttgtcatggtacaggcatggtgcgtgatctacgttctttatcactttcgatt
atgcgtaaagtggaagaaattgcactacgtgaacgccatggtgaagtacaggttgaagtt
cctgttgaaattgcagcatttttgctgaatgaaaaacgtcatagtctggtgtatttagaa
caaacttcaggtgttcgtgtcaccgtgttgccacaccctcacttggaaacacctcactac
gaaattcagtataatcctgaaggttttgcaccttctagctatgagcgtactgaagcgaca
cgttcaagtgaaaaggaacttggctacgagtcatctgaatggcatttagaagaagcagat
catagtcatgctgctgtacctgttcagtctgagcaaaataaacgtaaagctacggctcaa
acacctgcgccagcagcacaaaccgcggttgctcctaaagccgcaagcccatgcgcatgg
ttagagaatctatttgtacaaaaacaggctcaaaccgttgatcagtcacgctctgcccaa
aatgcagcatcagcgattgagcaaatggtgaatggtggtgcagtcagtcgtggtcaattt
ggtcaggtcaacgttgctagtgtgaccgaaactgtcactgttgcagcatctggcaacaat
gcgtatatgtctcaaacgcctgtagctaaacaggaagcacgtgacaataccactgaacgt
gacgagaaaaataatcgtccaaataacaacaaaaagcgtaaacacaaagatcagcgcgaa
cgtaccgagcgtgaacaaccacaacaacgtgagccaaatcaagagcaacaaccggctcaa
gttcatgaagaagtggtccaactgtcacgccatgagcaacgtgaactcaaacgtcagcaa
aagcgtcagcagccacaagaacaaaaccactcgcaaaatcaggcgcaaactgaagtacat
gcagaagaagccgtaccacgtcgtgaccgtaacaatcagcaacgtccaaatcgcccacat
cgcaaccgtgaccaaagtgtattagacaatgcccatcaaacgaccaataaacctgtagcc
aatgatgcaaaacaggtcacagtcgatgtggttgatgcgccacgtaatgaaatgatgacg
acagcactggtgattaatgtcgatcaagcgcaaagcgaaattgtggcattgaatccacaa
gttgaaccacaggaatcaccaaaacaggctgaaaatcctgttgcaaatccagttgaagaa
gtcgttgtaactgaagctcaactttctgaagcagcgactaaatccactgaagttgcgacc
gagcaaactcgctcacaagtgaaacgtgctagcaatgatccgcgtatgcgtcgtcgtcag
caacgtgaagcacagcaatctaaagtagcagcaccaaaagtacagccatcacaaattcct
gagctggccaactatacgttgggtagtctcattcgccatatctatggtgaagactgtacc
gtactgatcgaacagtttggacttgtgccaacgtttaatcgggctttgatcaagtttact
gagcaatatgccagttcacaggtcgcagaagcaaaaacggttgaggaagacaaaaaacct
gtaacacgtgatgcacaacttccaagcaagaaagcgcttgaagaaagtgaagcagcggag
gtgttaccattaacgccaccagaaacgcctgcaacgcgtgtagccaatgaccctcgtgaa
cgtcgtcgtttagcgaaacttgcggcagaacaagcgcatgagcaagccaaacaagctcaa
gctgtgccaaaagctgaaacggggaatgaacaaggtgcagaaatcgaagccgttgcctct
gaaaccgtagcgagtgcaactgaagctcctgaaactgtcgtattgcctgagcaatcgctt
gaaacagcaactcctgtttctaagcaaaaagcgacagcaccgacagaaaccgcacagcct
gaagtaaaagctgaattagaaaaagtttcgaccgcagctcaaactgaacctgtgcaagct
gaattaaatgaagtaactgcttcagagcaagcatcagaagtgaaagccaatgatgaaaca
actgaaaaatcagccactcaagagactgctgctgatgcggataaaccaagtcgtccgcgt
cgtccacgtggtcgtccgccgaaaaaggccagcacaactacggaataa
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