Acinetobacter ursingii: URS_2402
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Entry
URS_2402 CDS
T06299
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aug
Acinetobacter ursingii
Pathway
aug03030
DNA replication
aug03430
Mismatch repair
aug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
URS_2402
03430 Mismatch repair
URS_2402
03440 Homologous recombination
URS_2402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aug03032
]
URS_2402
03400 DNA repair and recombination proteins [BR:
aug03400
]
URS_2402
Enzymes [BR:
aug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
URS_2402
DNA replication proteins [BR:
aug03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
URS_2402
DNA repair and recombination proteins [BR:
aug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
URS_2402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Glyco_hydro_3_C
Motif
Other DBs
NCBI-ProteinID:
BBF78383
LinkDB
All DBs
Position
1:complement(2472051..2475614)
Genome browser
AA seq
1187 aa
AA seq
DB search
MQFVHLGIHTEFSITESIVRIPDLIKAAVNESMPALALTDLSNLHAAVKFYESCLSKGIK
PILGSEIRLNDAEHRVTLLAMTNDGWRSLTEIVSRGFIEGQQLSIPCVQKEWVLQQHQDM
IVLLGQHSDVGKMLCSSNPQKAEALLEAWQEKFGNRVYLALTRTDRAGEEDYIQEAVKLA
AKYHVGVVAHNDVHFIESDDFEAHEARVCIADGYVLADDRRPRNYSPAQYFKTAEEMAEL
FSDIPSALDNTYYIAQRCNVSLQLGTYFLPDYPIPEGFTIDTYFEHLSKVGLEERLELLY
PVAERDEDWNEIRKPYDERIKYEVDIILKMGFPGYFLIVMDFIQWAKNNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDVDFCIAGRDRVIDYVSRTYGRE
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMVPTKPLGVDLKQAIDMEPQLKDI
VTNPSNPDNDDASEIWDMALKLEGITRNTGKHAGGVVIAPGKITDYSAVMCEADGTSRVA
QFDKDDVEAAGLVKFDFLGLRNLTVIEDAIQNINKRSDVKEPLAIERVPLDDVDAYKVFA
DANTTAVFQFESVGMKRMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGEFEYL
HPLLESVLEPTYGIMVYQEQVMQAAQFCAGYTLGGADLLRRAMGKKKPEEMVKQRQIFIE
GAAQKDIDEATANHIFDYMEKFAGYGFNKSHAAAYALVAYHTAWLKAHYPAEFMAAVMSS
EMQNTDNVVFLIDDCRSNGLDVLPPSVNMSIYRFHASDEKTVVYGLGAIKGVGEQAMQSV
IDSREKDGPYTDLFDFCHRIDLKKINKRTLEALIRAGALDCLGIERSSLMAQLPEAVQAA
EQARQNRETGIMDLFGEVEEVQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPIDVYRSE
LKAFIPLKINELTPTRRGQTTVFAGLVLDVANFPNRIMITLDDGTARIEVSCNHERFQRF
KDIVQVEQVVVIEGEIYEREGFDRPMARLSKAFSLNEIRQKRANHIRIQPTQDLMTPALA
QELQQIILPFCNIDLCQHIPVQIAIEQNYATAELHLGQNWKVAPLDELLVKLRDYFGKES
VYIEYQVKSKAAKAAETVRTVPLAPPPTDLSMDEAMDLYQAEVSQYS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgttcatcttggtattcatacagagttttcgattaccgaatcaattgtgcgg
atacctgatctgatcaaagctgcggtcaatgaaagtatgcctgctttggcattaaccgat
ctttccaatttacatgctgcggtcaagttttatgagagttgtctctctaaagggattaaa
ccaattttgggcagcgaaattcgtctgaatgatgctgaacatcgcgttaccctgcttgcc
atgaccaatgatggctggcgtagtctgactgaaattgtgtcacgtggttttatcgaaggc
cagcaacttagtattccttgtgtacaaaaagaatgggttttacagcaacatcaagacatg
attgtgttactgggtcagcacagtgacgttggtaaaatgctgtgttcttccaacccacaa
aaagctgaagctttacttgaagcctggcaagaaaaatttggtaatcgggtttatcttgct
ctcacccgtaccgatcgtgctggtgaagaagattatattcaggaagcggttaaactcgct
gcaaaataccatgtcggagtcgtggctcacaatgacgttcactttattgaaagtgatgac
tttgaagcgcatgaagcgcgtgtctgtatcgccgatggttatgttctggcagatgatcgc
cgcccaagaaactatagtccagcacaatattttaaaacagccgaagaaatggctgaatta
ttctcagacattcccagcgctttagacaatacctattatattgctcagcgttgtaatgtc
agtttacaactgggtacttactttttgcctgattatccgattccagaaggctttaccatt
gatacctactttgagcatttatccaaagtcggtttagaagaacgtctggaattactctat
cctgttgccgaacgtgatgaagactggaatgagattcgtaaaccctacgatgaacgtatc
aaatatgaagttgatattattctaaaaatgggcttcccgggttactttctgatcgtgatg
gacttcattcaatgggccaaaaataacggcgtacctgttggcccaggacggggttcgggt
gcgggctcattggtggcgtatagtttaaaaattaccgatcttgaccccctacgctacgat
ctactatttgagcgtttcttaaacccagaacgtgtatcaatgcccgactttgatgtcgat
ttttgtattgcaggtcgtgaccgcgtgattgattatgtatcgcgtacttatggacgtgaa
gccgtgtcccagattgcaacctttggtacgatggcggccaaaggtgcaatccgagacgta
gcgcgggttttgggtaaatcctatggtttggccgatcgtatctccaaaatggtgccgacc
aaacctttaggtgtcgatctaaagcaagccattgacatggaaccgcagctcaaggacatc
gtcaccaatccctctaatccagataatgatgatgccagtgaaatttgggatatggcactc
aaactggaagggattacccgtaatacaggtaaacacgcaggtggcgtggtgattgcgccg
ggtaaaatcacagattattcggccgtcatgtgtgaagcagatggaaccagccgtgttgcg
caatttgataaagatgacgttgaagccgcaggcttggtcaaattcgactttttgggttta
cgtaacctgaccgtgattgaagacgcgattcaaaatattaataaacgtagcgatgtcaaa
gagccgctggcgattgaacgtgttccacttgatgatgtcgatgcctataaagtcttcgca
gatgcaaatacgacagcggtgttccagtttgaatccgtcggtatgaagcgcatgctcaaa
gaagcacgcccaagtaaatttgaagaaattattgcctttgtatctttgtatcgtcccggt
ccgatggatctgattcctgactttattcaccgtatgcatggtggcgagtttgaatatttg
catccattactcgaaagtgtactcgaaccgacttacggcattatggtgtatcaggaacag
gtgatgcaggcggcacagttctgtgcagggtatacacttggtggcgcagacttgctgcgt
cgagcgatggggaaaaagaaacctgaagaaatggtgaaacaacgccagatctttatcgaa
ggtgctgcccaaaaagatattgatgaagccacagccaaccatatctttgactatatggaa
aagtttgcaggctatggttttaacaaatcgcatgctgcggcttatgctctcgtcgcctat
catactgcgtggttaaaagcacattatcctgctgaatttatggccgcggtgatgtcatca
gaaatgcaaaacaccgacaacgtggtgtttttgattgatgactgccgtagtaatggtcta
gacgttttgccgccttctgtgaatatgtcgatttatcgcttccatgccagtgacgaaaaa
accgtggtctatggtttaggtgcgatcaaaggcgtaggcgaacaagccatgcaatccgtg
atcgactcgcgtgaaaaagacggcccttataccgacctgtttgatttttgccatcgaatt
gatctgaaaaaaatcaataaacgtactcttgaagcgttaattcgtgcaggtgcactagac
tgtttaggtattgaacgctccagtttaatggcacaattgcctgaagccgtacaggcggcg
gaacaagcgcgacaaaaccgtgaaactggaattatggatttgtttggtgaagttgaagaa
gttcaacgtaaacctgctaaacccgtaaaaccatggtcagatgaggttcggcttaaaggt
gaaaaagatacactgggcttatatttaactggccatccaattgatgtgtatcgttcagag
ttaaaagcgtttattccacttaaaattaacgagttgaccccgacgcgtcggggtcaaacc
accgtatttgcaggactggtgctggacgttgccaactttccgaatcgaatcatgattaca
ctggatgatggtactgcccgaattgaagtcagttgtaaccatgaacgctttcaacgtttc
aaagatattgtccaagttgaacaagtggtggtgattgagggtgaaatttacgaacgagaa
ggctttgatcgtccaatggcacgtctaagcaaagcgtttagcctgaatgaaattcgtcaa
aaacgtgctaatcatattcggattcagccgacccaagatttaatgactccagcactggct
caagagctacaacagatcattttaccattttgtaatattgatctgtgccaacacattccc
gtgcaaatcgcgatagaacaaaactatgctacagccgaattacatttaggacaaaactgg
aaagttgcaccactggatgaactactggtgaaattacgtgattattttggtaaagaatcg
gtgtatatcgaatatcaagtgaagtctaaagccgcaaaagcagccgaaaccgtacgaacc
gtgccacttgcaccaccgccaaccgatctgtctatggatgaagccatggatttgtatcag
gctgaagtttctcaatattcttaa
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integrated database retrieval system
