Acinetobacter ursingii: URS_3004
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Entry
URS_3004 CDS
T06299
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
aug
Acinetobacter ursingii
Pathway
aug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
URS_3004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aug03019
]
URS_3004
Enzymes [BR:
aug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
URS_3004
Messenger RNA biogenesis [BR:
aug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
URS_3004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBF78976
LinkDB
All DBs
Position
1:complement(3085933..3087084)
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AA seq
383 aa
AA seq
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MVSGFETLNLHPQLKKAIDALGFKQMTPIQQKVLTYTLAGHDAIGRAQTGTGKTAAFLVS
IINDLLNNPIQEQRYRGEPRALILAPTRELALQIESDAKELTKFTDLKLLTLVGGVDFDK
QKKPLNANFLDILVATPGRLIDFIEQKEIWLDQIEFLVIDEADRLLDMGFIPSVKRIVRY
SPRKEERQTLMFSATFSYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYVVEKKDKYR
LLQDILRDEPIDKVMIFANRRDQVRRLYDHLKKDGYRVGMLSGEIAQDKRLKMLEQFKQG
KNNIMIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGSQGVSISFLSEDDA
FYLPEIEKAIGKKLPLTRLEGYC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggtatctggttttgaaaccttgaatctacatccgcaacttaaaaaagcgattgatgca
ttagggtttaagcaaatgaccccaattcagcaaaaggttttaacatatacactggcaggg
cacgatgctattggtcgcgcgcagacaggaacgggtaaaacggcagcatttttggtcagt
atcatcaatgatttgctcaataatccgattcaggaacaacgctatcgtggtgagcctcgc
gctttgattcttgcgccgactcgtgaactggcattgcaaattgaaagtgatgctaaagaa
ctgaccaaatttacagatttaaaattactcaccttggttggcggtgtggatttcgacaag
caaaagaaaccattgaatgcgaattttttggatattctggtcgcgacgcctggtcgtttg
atagattttattgaacaaaaagaaatctggcttgatcaaatcgaatttttggtgattgat
gaagcagaccgtttactggatatgggttttattccttcggtaaaacgtattgtgcgttat
tcgccgcgtaaagaggaacgtcagactttaatgttttcggctacctttagctatgatgtc
ctgaatctggcacgtcaatggttatttgaaccggtgactgttgaaattgaacctgaacaa
aaaaccaataatgacgttgaacaacgcgtttatgtggtggagaaaaaagataagtatcgt
ttgctccaagatattttacgtgatgagcctatcgataaagtcatgatttttgccaatcgt
cgagatcaggtgcgccgtttatatgatcatctaaaaaaagatggctatcgggtgggtatg
ttatcgggtgaaattgcgcaggacaaacgcttgaaaatgcttgagcaatttaagcagggt
aaaaataacatcatgattgcaacggatgtagcaggacgtggtattcatgtcgatggtgta
tcgcatgtggtgaactttactttgcctgagcagtctgatgattatgtgcatcgtatcggt
cgaacagggcgagcgggttcacaaggtgtgagtatcagttttctttctgaagatgatgcg
ttttatttgccagaaattgaaaaagccattggtaagaagttacctttaactcggttggaa
ggttattgctag
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