Acinetobacter ursingii: URS_3058
Help
Entry
URS_3058 CDS
T06299
Name
(GenBank) RNA polymerase associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
aug
Acinetobacter ursingii
Brite
KEGG Orthology (KO) [BR:
aug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aug03021
]
URS_3058
Transcription machinery [BR:
aug03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
URS_3058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
DUF6448
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBF79030
LinkDB
All DBs
Position
1:complement(3144886..3147723)
Genome browser
AA seq
945 aa
AA seq
DB search
MEKLQQFAIGQRWLSDTETELGLGVLIDVDERSISILFPKSDETRVYARNNAPLSRIIFN
INDEVQDQEGSKWLVESIEDRHGVLRYNVVRTLESGEQERKALNETRIGAQIQLSKPVDR
LLASQVDYKEWYDLRIEALIMQAQMQTSPLRGLIGARVGLIPHQLYIAHEVGQRFAPRVL
LADEVGLGKTIEAGLIIHQQLKTCRSERILILVPDSLQYQWMIEMRRRFNLHFSLFDLTR
TASMKEHDPDLNPFSTEQCIIASVDLMIDHEDLREQALEAGFDLLVVDEAHHLMWSEEEG
GNDRYDLVEEFAQQTAGVLLLTATPEQLGVESHFARLRLLDPQRFSRLDRFLDEEEQYQQ
TAKVAEVLMSDEALTEEHLAALEGLLGHRIDDQPEQRYQAIQELLDRHGTGRILFRNTRE
AIQGFPGRDCQPAALPAPADWSMDGKLREQMWPEEGQLDGAWMETDPRVAWLMEILRKDL
KHKKVLLIARSGPVVEALENALRLHAGIRTAMFHEGMSLLERDQAAAYFAEDSYGAQILL
CSEIGSEGRNFQFASDLILFDLPANPDVLEQRIGRLDRIGQENRIQIHVPYLIGTAQERM
FRWYNEALNIFGSISPTAQTLQENFIVDLKECLLADLGQRFEDLLEEVNVQRQALEAELQ
AGRDRLLEYNSCRPVVAQQIVEALEDYDDNTTLPMFMKRFMSSTNIDFDEQSNGTVIIKP
TDQMQVQGLTLDEEGMTATFYRDQAQIREDAQYLTLEHPFVESVMELINTQAFGSTNVAV
LKSNALKQGSVLIEVWFKVDVVAPKALNLPSSLPKQLIRVLLSETGQDLSEKIDPAILKP
YLHHLDGNSCRQVVKARREVIEQRYTQALDIAKTSLPSLIEQAKQHYGQKWQYEIERLSY
LKQFNPSIRPDEIERLQKLQKEGLNLLDGLAVTPEAIQVMVVVKP
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaattgcagcagtttgctattggtcaacgttggttatcagatacggaaactgaa
ctcggcttgggtgttttaattgatgttgatgaacgttcaatcagcattttattcccaaaa
agtgatgaaactcgtgtctatgcacgcaacaatgcacctttatcgcgtattatttttaat
atcaatgatgaagtgcaggatcaagaaggcagtaagtggctggttgaatccatcgaagat
cgtcatggggtgttacgctacaatgttgtacgtactctagaaagtggtgaacaagagcgc
aaagcactgaatgaaacccgtattggcgctcaaattcagttatctaaacctgtagatcgc
ttgctggcaagtcaagtcgattataaggaatggtacgatttacgcatagaagcgttgatc
atgcaggcacaaatgcaaaccagtcctttgcggggtttaattggtgcgcgtgttggctta
attccacatcagctttatattgcacatgaagtcggtcagcgttttgcaccgcgtgtactg
cttgcagatgaggtgggtttggggaaaaccatcgaagcaggcttgatcattcaccaacaa
ctcaaaacgtgtcgttcagaacgtattctgattttagttcctgattctttacagtatcaa
tggatgattgaaatgcgtcgccgtttcaatctgcatttttctttatttgatttgacgcgt
actgcgtcgatgaaagaacatgatccagacttaaatccattttcgactgaacaatgcatt
attgctagcgttgacttgatgattgatcatgaagatttgcgtgagcaggcgcttgaagca
ggttttgacttgctggtggtcgatgaagcacatcatttgatgtggagcgaagaagaaggt
ggtaatgaccgttacgatctggtcgaagaatttgctcagcaaactgcgggtgtgctgcta
ctcactgcaacgcctgagcaattgggtgtagaaagtcactttgcccgtttacgtttactc
gatccgcaacgttttagtcgtctggatcgttttttggacgaagaagagcaatatcagcaa
actgcgaaagttgctgaagtactgatgtcagatgaagcattaacagaagagcatttagct
gcgcttgaaggtttattgggtcatcgtattgatgatcaacctgaacagcgttatcaagcc
attcaagaattattggatcgtcatggaacgggtcgtatcttgttccgtaatacccgtgaa
gcgattcagggtttcccaggacgtgattgtcagcctgccgctttgccagcacccgcagat
tggtcgatggatggtaagttgcgtgagcaaatgtggcccgaagaaggtcaactggatggt
gcgtggatggaaacagatccacgcgtcgcatggctcatggaaattttgcgtaaagattta
aaacataaaaaagtattactgattgcgcgtagcggacctgtggttgaagcactggaaaat
gcattgcgtttacacgcaggtattcgtaccgcgatgttccatgaagggatgagcttactg
gaacgtgatcaggctgctgcatatttcgctgaagatagttatggtgcgcagattttgctc
tgctctgaaattggttccgaaggtcgtaatttccagttcgccagtgatttgattttattc
gatctacccgcaaatcccgatgtgttagagcaacgtattggtcgtctggatcgaattggt
caggaaaatcgtattcagattcatgtgccttatttaattggaactgcgcaagaacgaatg
ttccgttggtacaacgaagcattgaatatttttggtagcatttcgccaaccgcgcaaacg
ttacaggaaaattttattgtcgatctaaaagaatgcttattggctgatcttggacagcgt
tttgaagatttacttgaagaagtgaatgttcagcgtcaggcattggaagctgagttacaa
gcgggtcgtgatcgtttgctggagtacaattcttgtcgtcctgtcgttgcacaacagatt
gtagaagcgcttgaagattatgatgacaataccacgctgccgatgtttatgaagcgattt
atgtcatccaccaatatcgactttgatgagcaaagtaatggtacggttattatcaaaccg
actgatcaaatgcaggtacagggtttaaccctagatgaagagggcatgaccgcgactttt
tatcgtgatcaggcgcaaattcgtgaagatgcgcaatacctgacattggaacatccgttt
gtggaaagtgtcatggagttgatcaatacccaagcctttggtagtaccaatgtggcggta
ttaaagtctaatgcacttaaacaaggctccgtattgattgaagtctggttcaaagtagat
gtggttgcccctaaagctcttaatcttccgtcaagcttaccaaaacagttgattcgtgta
ttgcttagtgaaacgggtcaggatttgtctgaaaagattgatccagcgattttgaagcct
tatttgcatcatctggatggtaatagctgtcgtcaggtcgtgaaagcgcgtcgagaagtg
attgaacaacgctatactcaggcacttgatattgcaaaaacgtctttaccgagcttgatt
gaacaagccaaacaacattatggtcaaaaatggcaatatgaaattgaacgtttgagctat
ttaaaacagttcaatccaagtattcgtccagatgaaattgaacgtctgcaaaaattgcaa
aaagaaggtttaaatttactggatggattagctgtgacccctgaagccattcaagtaatg
gtcgtagtaaaaccataa
DBGET
integrated database retrieval system
