Acinetobacter ursingii: URS_3294
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Entry
URS_3294 CDS
T06299
Name
(GenBank) ribonuclease HI
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
aug
Acinetobacter ursingii
Pathway
aug03030
DNA replication
aug03430
Mismatch repair
aug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
URS_3294
03430 Mismatch repair
URS_3294
03440 Homologous recombination
URS_3294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aug03032
]
URS_3294
03400 DNA repair and recombination proteins [BR:
aug03400
]
URS_3294
Enzymes [BR:
aug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
URS_3294
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
URS_3294
DNA replication proteins [BR:
aug03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
URS_3294
RNase H
URS_3294
DNA repair and recombination proteins [BR:
aug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
URS_3294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
DNA_pol_A_exo1
Rv2179c-like
ATG29_N
Motif
Other DBs
NCBI-ProteinID:
BBF79256
LinkDB
All DBs
Position
1:3399801..3401279
Genome browser
AA seq
492 aa
AA seq
DB search
MISQTITLYVDGACKGNPGLGGWGAYIISQDAEHKLFGGEAETTNNRMELTAAIEGVSFC
PKDAKLIIWTDSNYVKQGITEWIHGWKKKNWKDVKNPELWQQLDQVCAGRDIEWNWIKGH
AGHAGNEMADQLANLGVQHPEKQHVVVPEAEWIGHQLAQLDAKMKTEAKKKSENDWLLDD
PFGLDVPEDAFDNHDLDSDDLTINEYPIASTDDEALVEIEDEKIVESADENEQTATQLIN
NPIDQSKTHPHIVTTPATLNVQGPRQLILDTETTGFYFQDGDRIIEVGAIEMINRKLTGS
SIHIYINPEKPVGESENIHGISDDFLKDKPKYAEIADVLFDYLKGAEIIAHNATFDMNFL
DTEFKRAGLVALSEVCAVTDTLALAKSKHPGQKNSLDALVRRYDIPARDRTFHGALLDAE
ILSDVYLAMTGGQVSFDMDVLSQHENHGQQNSRQRVQIDLPVILPEPEELARHETWVKQF
EEKQGKPCFFAK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgatctcacaaacaatcacgctctatgttgatggtgcctgcaagggtaatcctggctta
ggtggttggggtgcttatattattagccaagatgctgaacataaactttttggtggtgaa
gccgaaaccaccaacaatcgcatggaactgaccgctgccattgaaggtgtttctttttgt
ccaaaggacgcaaaactcatcatctggacagattccaattatgtcaaacaaggcattact
gaatggattcacggttggaaaaagaaaaactggaaagatgtcaaaaatcctgagctttgg
caacaactggatcaagtctgtgctgggcgggacatcgaatggaactggattaaaggacat
gcaggacatgcaggcaatgaaatggcagatcaactggccaatttaggcgtgcagcatcct
gaaaagcagcatgtggtcgtgcctgaagctgaatggattggacaccaactggctcaacta
gatgcaaaaatgaagaccgaggcaaaaaaaaaatctgaaaatgactggctgctcgacgat
ccgtttggactagatgttcccgaggatgcttttgataatcatgaccttgatagcgacgat
ttaaccatcaatgaatatcctatcgcctctacagacgatgaagcgttggtagaaatagaa
gatgaaaagatagttgagtcagcggatgaaaatgaacaaacagcaacccaattaattaat
aaccctatcgatcaaagcaaaacgcatccacatattgtcaccacgccagcgaccttaaat
gttcaagggccacgccaacttattttagatacagaaaccacaggtttttattttcaggat
ggtgatcgcattattgaggtcggcgcgattgaaatgatcaatcgtaagttaacaggcagt
tctattcatatttatatcaatccagaaaagcccgttggtgaatccgaaaatattcacggc
atcagtgacgattttctcaaagacaaacctaaatatgcagaaattgcggacgtactcttt
gattatctcaaaggtgcagaaatcattgcgcataatgccaccttcgatatgaactttttg
gataccgagttcaaacgcgctggtttagttgccctttcagaagtgtgtgctgttaccgac
accttggcactggccaagagtaagcatccaggacaaaaaaactcattagatgcattggtc
agacgctacgacattcctgcgcgtgatcgtaccttccatggcgcgttgctagatgccgaa
attttgtcagatgtctatctggccatgactggcggacaagtgtcatttgatatggatgtc
ctatcacaacatgaaaatcatggacagcaaaatagtagacagcgtgtgcagattgatctc
cctgtgattttgcctgaacccgaagaattagcaagacatgagacttgggtcaaacaattt
gaggaaaaacagggtaagccttgcttttttgccaaataa
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