Aerococcus urinaehominis: AWM75_01705
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Entry
AWM75_01705 CDS
T04284
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
auh
Aerococcus urinaehominis
Pathway
auh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
auh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWM75_01705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
auh03019
]
AWM75_01705
03016 Transfer RNA biogenesis [BR:
auh03016
]
AWM75_01705
Enzymes [BR:
auh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AWM75_01705
Messenger RNA biogenesis [BR:
auh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AWM75_01705
Transfer RNA biogenesis [BR:
auh03016
]
Prokaryotic type
tRNA degradation factors
AWM75_01705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
S1
OB_RNB
RNase_II_C_S1
RRN3
S1CSD-TOTE-2
S1_RRP5
OB_HELZ2
Motif
Other DBs
NCBI-ProteinID:
AMB98786
UniProt:
A0A109RHF7
LinkDB
All DBs
Position
complement(381067..383484)
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AA seq
805 aa
AA seq
DB search
MSLNKNQVKEKILTAISQHGQPATLQDYASELGYIASDDFAEFVKVVAELERQQKIVIAD
DGSLSLSHHQEVLVGDFHQNQKGFGFVSVGELANDIFIPRGKTGGAMNGDRVKVKIIREE
QAWKDKSAEGKIIAIDQRHLTQVTGEYTPFTSDLQAETGFVGGVKLLNKGLEQVTAMVKD
QGLKAVDGEIVVVSIDEYPTSDSPFKIAGPIIQKLGHKDEPGVDILAVLNMFDIPHEFPD
QVLNEADQVADEISNQDLQGREDFRNQLVITIDGADAKDLDDAISLRKVGQKYELSVHIA
DVSYYVKEGSQLDAEAYERGTSVYLTDRVVPMLPQRLSNGICSLHPRVDRLTMSCVMLVN
QQGQVEDYRIGPSVIESKYRLTYDTVNAILEDEDPVAIDENKAVVPMLREMGELHQILAQ
MRQRRGAIDFDTKEAEIIVDNEGHPLDILVRERGIGERLIESFMLCANETVARHFDQGHL
PFMYRVHEQPDAKRMQSFLEFSSTFGLRLTGSSETIKPKQLQQALTKIDGEPYEQMVSTM
LLRSMKQARYDTQALGHFGLAAEDYTHFTSPIRRYPDLIVHRLIRRYKEENSQLVKQSRL
VADLPDIAEHSSNMERRAVDAERETDSLKKAEYMQDKIGMTFQGIISSVTSFGLFVELAN
TVEGLVHISTMKGDYFNYIDSQMTLIGERTGLRFSIGDVVTVKVVKADVDSREIDFNLVY
SEDQENQLASQARTKTNKGKVKRKKHRNSQEANHDKKAKPGRQSAKRTHKKQGKRTKAEK
NIDKQKRQNKKFVIRQSKNNRRKKK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
attagtttgaataaaaatcaagtaaaagaaaaaatattaactgcaattagtcagcatggt
caaccagctactctgcaagattatgctagcgaattaggttatatagctagcgatgacttc
gctgagtttgtaaaagttgttgctgaattagaacgccaacaaaaaatagtcattgcagat
gatggtagtctcagtctctctcatcatcaagaagtcctagttggtgattttcatcaaaat
caaaaaggctttggatttgtcagtgttggggaactagccaatgatatttttattcctaga
gggaaaactggcggcgccatgaatggagatcgcgttaaagttaagattattcgtgaggag
caggcttggaaggataaaagtgctgagggtaaaattatagccattgaccagcgacatctc
actcaggttaccggtgaatatacaccctttaccagtgacttacaagcagaaacaggcttt
gttggtggtgtcaagcttttaaataaagggttagaacaggttactgccatggtgaaagac
caaggattaaaggctgttgatggagagattgtcgtagtaagtattgatgaatatccaaca
agtgattctccatttaagatagctggtccgattattcaaaaattgggacacaaagatgaa
cctggtgtcgatattttagccgttttaaatatgttcgatatcccgcatgaattccccgac
caggtattgaatgaagctgaccaagtagctgatgaaattagtaatcaggacttgcaaggc
cgcgaagattttcgtaatcaattagtcatcacaattgatggtgctgatgctaaagactta
gacgatgcgatatccttgcgtaaagttggccaaaaatatgaattgagtgttcatattgcc
gatgtttcatattatgtgaaggaaggtagccagctggatgcagaagcctatgaacgtggg
acatcagtttatttaactgaccgggttgtaccaatgctaccacagagattatctaatggt
atttgctccctacatcctcgcgtcgaccgtttaacaatgtcttgtgttatgcttgtgaat
cagcaagggcaggttgaagattatcgcattggtccttcagtgattgaatccaaatatagg
ctcacttatgatactgtgaatgcaattttagaagacgaagaccccgtagccattgatgaa
aacaaggcagttgtgccgatgctaagggagatgggcgaactacatcaaattttagcacag
atgcggcaacgtcgtggtgctattgatttcgacactaaagaggcggaaattattgttgat
aatgagggtcatccgctcgatattttagtgcgggaaagaggaattggtgagcgtttaatc
gaatcctttatgctgtgtgccaatgagacggttgcccgccattttgaccaggggcatctg
ccctttatgtatcgtgtccatgaacagccagatgcaaaacgtatgcaatcgtttctagag
ttctcgtctacattcggcctgcgattaacaggatctagtgaaacaataaaacctaagcaa
ttacaacaggctctgactaaaattgatggtgagccatatgagcaaatggtttctactatg
ttactacgctcgatgaaacaagcccgctatgatacgcaagccttaggccactttggctta
gccgccgaagattatacccacttcacctctccaattcgtcgctacccagacttaatcgtt
caccgattaatcaggcgatataaagaagaaaatagtcaattagtaaaacagtcccgattg
gtagcggacctaccagatattgctgaacattcttcgaatatggaacgtcgtgcggttgac
gcagagcgtgagacagacagcttgaaaaaagcagaatacatgcaagataagatcggcatg
acctttcagggcattatatcttcagtaactagttttggcttatttgtagagcttgccaat
acagttgaagggctggtacacatttcaactatgaagggagactattttaattatattgat
agtcaaatgaccctaattggtgagcgaactggtttacgtttttcaattggtgatgtggta
actgttaaggtagttaaagcagatgtggatagccgagaaatagactttaatttagtatat
agtgaagatcaagaaaatcagctagctagtcaagcaaggacaaaaactaacaagggtaaa
gttaagcgtaagaagcatcgtaatagtcaggaagctaaccatgataaaaaagctaaacct
ggccgtcaatcagcaaagagaacccataagaaacaaggaaaaagaacaaaagctgaaaaa
aatatagataaacaaaaaagacaaaataaaaaatttgttattaggcagagtaaaaacaac
aggcgtaagaaaaaataa
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