Aerococcus urinaehominis: AWM75_04065
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Entry
AWM75_04065 CDS
T04284
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
auh
Aerococcus urinaehominis
Pathway
auh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
auh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWM75_04065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
auh03019
]
AWM75_04065
03400 DNA repair and recombination proteins [BR:
auh03400
]
AWM75_04065
Enzymes [BR:
auh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWM75_04065
Messenger RNA biogenesis [BR:
auh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWM75_04065
DNA repair and recombination proteins [BR:
auh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AWM75_04065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
Acyl_transf_1
HHH
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AMB99232
UniProt:
A0A0X8FM84
LinkDB
All DBs
Position
complement(906442..908220)
Genome browser
AA seq
592 aa
AA seq
DB search
MSTQAALEKLQEYFGYSSFRPGQDQIIEAILAGHDCLAILPTGGGKSICYQIPALLLPGL
TVVISPLISLMKDQVDSLNRYGIPAAYLNSATSSDDYQTIVQGIYSGQLKLLYLAPERLD
QTGFADWLAQQNISMLAVDEAHCLSQWGHDFRPSYRQIKGFLAKLAIRPVLAAFTATATA
RVQADIIQQLDLNQPQTFVASFDRPNIRLTVQQPEAKMKALMSRLNHDQATIIYAQTRKN
VDKIYDHLKKKGYATAKYHAGLTSQDRQVSQEAFIHDQVNIIVATNAFGMGIDKTDVRQV
IHYNMPTDLESYYQEAGRAGRDGLPAEAVLLFSKQDIMTAKFLIRDNQDPYVDRRLQAMI
QYANQTSCLRHYLLAYFGEDQPGSCGNCSVCLGQHQVKDMTREAQMILSCLIRMGYAYGA
TLLAQVLRGANNQKIRDKGFDRLSTYGLMQAYPEGQVKDIISQLLADGYLRLTDYRGLVV
TERAREILAGTKQIFIKEELATAKSRPFTKPDLPVVDDDLYEILRQVRYRLAKEEGVPAY
VIFSNQSLADMANQQPTEYSEFLAVEGVGEIKAEKYWEEFTQAILDYQDQQD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
ttgtctactcaagccgctttagaaaaattacaagaatattttggttattcaagctttcgt
ccaggccaagatcagattattgaagctattttagcgggacacgattgtttagccattctc
ccgaccgggggcggtaaatctatttgctatcaaatccccgccctcttgttaccaggctta
acagtagttatttcaccactaatctctttgatgaaagaccaggttgatagcttgaatcgc
tacggcataccagccgcctaccttaattcagctacttccagtgatgactatcaaacaatc
gtccagggtatatatagtggccaactcaagctactctatctagccccagaacgtttagac
cagacgggtttcgcggactggctagcccagcaaaacatcagcatgctagcagttgatgag
gctcattgtctatcccaatggggacatgattttaggccgtcctaccggcaaattaagggg
tttctagccaaattagcaattagacctgtcctagcagcctttacggcaacagcgacagct
cgtgtgcaagctgatattattcagcaattagatttaaatcagccgcagacctttgtagcg
agtttcgaccggcccaatatccgtctaacggtccagcaaccagaagctaaaatgaaagcc
ttaatgtcacgcttaaatcacgaccaggccactattatctatgcgcaaacccgcaaaaat
gttgataaaatctatgaccacctgaagaagaagggctatgccacagccaaatatcatgcc
ggcctgactagccaagaccgccaggttagccaagaggcttttattcatgaccaggttaat
attattgttgctaccaatgcttttggcatggggatagacaagacggatgtccggcaggtt
atccattataatatgccaactgatttggaatcctattaccaagaagccggccgggctggt
cgtgatggtttgccagccgaagccgttctccttttctctaagcaggatataatgacggct
aagtttttaatccgtgacaaccaggacccctatgttgaccgtcgcttgcaagctatgatc
caatatgccaaccagacatcttgcttgcgtcattatttattggcttattttggcgaagac
caacctggttcttgtgggaattgttccgtttgtttgggccaacatcaagtgaaagatatg
acccgtgaggctcaaatgatactatcctgtctgattaggatgggttatgcttacggtgcc
accctcttagcccaagttttacgcggtgccaataatcagaaaatccgtgacaagggtttt
gaccgcttatcgacttatggcttgatgcaggcttatcctgagggccaagtaaaagatatt
atttcgcaattgctggctgatggctacctacgcttaactgactatcgcggcctagtggtg
actgaacgggctcgtgagattttagctgggaccaagcaaatttttatcaaagaagagctg
gcgactgctaaaagtaggccctttaccaagccagatttgccagtggtggatgatgacctt
tatgaaattctccgtcaagtccgttaccgtctggctaaggaggaaggggtaccagcatat
gttattttcagcaatcaatctctggcggatatggctaaccagcagccaactgagtatagt
gaatttctagctgttgaaggggttggtgaaattaaggctgaaaaatattgggaagaattt
acccaggcgattttagattaccaagaccagcaagactag
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