Aerococcus urinaeequi: APT62_05610
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Entry
APT62_05610 CDS
T04249
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
aui
Aerococcus urinaeequi
Brite
KEGG Orthology (KO) [BR:
aui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aui03400
]
APT62_05610
Enzymes [BR:
aui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APT62_05610
DNA repair and recombination proteins [BR:
aui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
APT62_05610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
ResIII
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALZ87972
LinkDB
All DBs
Position
complement(1243571..1247425)
Genome browser
AA seq
1284 aa
AA seq
DB search
MKNRQKQTTIPLQTEANARYTADQWAAIHLEGDNLLVSASAGSGKTSVLVQRILQKVRRG
YGVDELLVVTFTEKAASEMKERLEVALQEMINEESDADSRQHYLQQIAKLPQANISTIDA
FCKQVIQRYYFLIDLDPVYRLLTDETENMMHFENVWEALKEDLLAEGNPDYLRMAKHFAS
DRKDDKIDQLIFDLYNKSRVHTHPNDWLDGLVAKYPDEDTPYGESDFYQEYVVPALIDEI
EALENTARLYIEDLPVAEAVGFEKMAISVKEKLAYLDQLKTNVKASYKDAYQQIIATSFP
ALVRKSKKDFEDGNDAQNDLRTQLKDRHDKTIKDVFDKDILPYFTFDEHYQGLFIQDAKK
LGQAIINVEKVFTERMTAHKFDQRILDFSDIELFTYQILSKQLADAETGDGGSVSGNVNT
MNEAKAYYRDKFTEVMVDEYQDVNALQEAILQAVSGNPEHPNMFMVGDVKQSIYRFRFAE
PGLFIHKFNQFADGNGGQRIVLAENFRSRADVLDFTNFIFRQVMDPQVGQIAYDEDAALK
LGFTAYPETDRMQTEILLYEEEDGSEASDYDQEGLDGEVSNGTKMQAELIAQSILDKVNN
QHMIYDKKLQADRPITFNDIVILVATRRNHSELEDVFAQYKIPLMLDDSANYFQRTEIRV
MLNVLKFIDNPYQDIPLAAILRSPIIGLNEQDLAKIRIANKQATYYDAMKTYMAMDEGKD
ERIAEKLRILNDWHLAWRDIARDKPLATLIWQIYTDTGFLDYVGGMPNGEIRQNNLHGFY
KLASTYEASAFKGIFQFIRFVEKIQEKDNDLQAPKHGDEARSAVHVYTIHHSKGLEFPLV
YVYNISKRFNTQDLRNPVIYNDAIGIGVKLSDSTRHITYPNMFEMMAKRFEKKDMLAEEM
RKLYVALTRAEQQLVLVGMVKNFDTTIGKWQGLLMKDEQLSPSGRIKANSLLDWIGPALM
RHHDFDQVNQSVHIPDYLANTKTNFRVAVVSSQDALAGRSKWVQTVDESNQVDQAELLAA
IFTDDKMATSDQANKQVIQLPATDLDYAYQSATKTTSFQSVSELKRMLQDPSDLDLQPWS
VNNQNKLTKTFRYTEEDYDQPSFLAKEQAVTPTAIGSAAHLLMQKVNLTAKPSKATFKAL
FDELCQLEILSNKLWPHIQVDKLVAFFDTAAGQLILKQVAHVYREETFSLMVAGSEIFTD
MATDDDLLVHGTIDGFILLQDEIFLYDFKTDRIAYLNESQQEQTLIDRYQGQMDLYAQAL
ETIWERPVTQKMIISLDTLKTFFV
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatagacaaaaacaaaccactattccattacaaacagaagctaatgcccgttat
acagccgaccaatgggcagcgattcatttagaaggggataacctgctcgtttcagcctct
gctggatctggtaaaacgagtgtccttgtccaacgtatcttgcagaaggtacgacgtggc
tatggggtggatgagttactggttgtaacgtttaccgaaaaagcggctagtgaaatgaaa
gagcggttggaagtagccttacaagaaatgatcaatgaagaatctgacgccgacagccgt
caacattatctgcaacaaatcgccaaattgccgcaagccaatatttcaaccattgacgcc
ttttgtaagcaagtcatccaacgttattatttcttgattgatctagacccagtttaccga
ttattaaccgatgaaactgaaaatatgatgcattttgaaaatgtttgggaggccttgaaa
gaggacttattagcagaaggcaatccagattatttacgtatggcaaaacattttgcttcc
gaccgtaaagatgacaagattgaccagttgatttttgacctatataacaagtctcgggtc
catacccatccaaacgactggttagatggattagtagccaaatatccggatgaggatacc
ccctacggtgagtctgatttttatcaagaatatgtggtccctgctttaatagatgaaatt
gaagctcttgaaaatactgcacgactgtatattgaagacctgccggttgctgaagcggtt
ggttttgaaaaaatggccatttctgtgaaagaaaagttagcttacttagaccaattgaag
acgaatgtgaaggcctcttataaagatgcctaccaacaaattattgcaacatctttccct
gctttagttcgaaaaagtaagaaagactttgaagatggtaacgacgcacaaaatgattta
cgaactcagttaaaagaccgacacgacaaaacaattaaggacgtattcgacaaggatatc
ttgccttactttacctttgacgagcattaccaaggcctctttattcaagatgctaaaaaa
cttgggcaagccattataaatgtggagaaggtctttactgaacgaatgacagcccataaa
tttgaccaaagaatcttagatttctcagatatcgaactttttacctatcaaattttaagt
aagcagttagcggacgcagaaacaggcgacggcggaagtgtgagtggaaacgtcaatact
atgaatgaggctaaggcttactatcgggacaagtttactgaagtcatggtggatgagtat
caggatgtcaatgccttacaggaagccattctacaagctgtatcagggaatccggaacat
ccaaatatgttcatggtgggggatgtgaagcagtcgatttaccgtttccgctttgctgaa
ccaggtttatttatccataaattcaaccaattcgcggatggtaatggagggcagaggatt
gtcttagcggaaaacttccggtcaagagcagatgtccttgattttaccaactttatcttc
cgccaagtcatggatccacaagtggggcagattgcttatgatgaggatgcagcccttaaa
ttgggctttaccgcctatccagaaaccgaccggatgcagactgaaattctcctttacgag
gaggaagatggcagtgaagctagcgattacgaccaggaaggtttagacggtgaggtctca
aatgggacgaaaatgcaagcagaattgattgcccaatccattttggacaaggtcaacaac
cagcacatgatttatgataaaaaactgcaggcagatagacccatcacctttaatgatata
gtaattcttgtagcaactagacgtaaccattcggaattagaggatgtttttgcccaatat
aaaattcctttgatgttggatgattcggcgaactatttccagcgtacagaaatccgtgtc
atgttgaatgtcttaaaatttatcgataatccttaccaagatattccactggcggctatt
ttgcggtcaccaattattggtttaaatgagcaagacctagcaaaaatccggattgccaac
aaacaagcaacttattatgacgctatgaaaacttatatggccatggatgaagggaaagat
gaaagaatagctgagaaattgcggattttgaatgattggcacttagcgtggcgggatatc
gcccgcgacaaaccgttggcgactttaatctggcaaatttatacagatacgggcttcctc
gattatgttggtgggatgccaaatggcgagattcggcaaaataacttgcatggtttttat
aaattggcgtctacctatgaagcgtcagcctttaaggggattttccaattcatccgcttt
gttgagaaaattcaagagaaagacaacgacctgcaagcaccaaaacacggggacgaagct
cgatctgcggtccatgtctatactattcatcattcaaaaggtttagagtttccgctcgtt
tacgtctataacatttccaagcgttttaacactcaagatctaaggaatccggtgatttat
aatgacgctatcggtatcggggtgaaattgtctgatagcacacgccacatcacctatcca
aatatgtttgaaatgatggctaaacgctttgagaagaaagacatgttggctgaagaaatg
cgaaaattatacgtggccttaactcgagcggaacagcaactggtattagtgggtatggtg
aaaaacttcgataccacgattggcaagtggcaagggcttttgatgaaagacgagcaacta
tcgccatcaggccggattaaagccaacagtctacttgattggattggcccagcgctgatg
cgccaccacgattttgatcaggttaaccaatcagtccatattccagactacctagccaac
actaagaccaatttccgggttgcagtcgtttctagccaagacgcacttgcgggccgtagt
aagtgggtacagacggtagatgaatccaaccaagttgaccaagcagaacttttagcggcc
atttttacagatgacaaaatggctaccagtgaccaagctaataaacaagtcattcagcta
ccagctaccgacttagattatgcttatcaatcggcgaccaagacaacatccttccaatca
gtatcagaattgaaacggatgcttcaagatccaagtgacctcgacttgcaaccttggtca
gtcaacaatcaaaataaattgactaaaaccttccgttatactgaagaggactatgaccaa
ccgagtttcttggccaaagaacaagctgtcacaccaacagccattgggtcagcggcccat
ttgttaatgcagaaggtgaatttaacggctaaaccaagtaaagcgacctttaaagcgctc
tttgatgaactatgccaactagaaattttaagcaataaactttggccccatattcaagtg
gataaactagtagccttcttcgatacggcagcgggacaattgattttgaaacaagttgcc
catgtatatagagaagaaacattctccctaatggttgctggatcagaaatctttacggat
atggcaacagatgatgacttgttggtccacgggacaattgatggttttattttattacag
gatgaaatcttcctgtatgactttaaaactgaccggattgcttatctaaatgaaagccag
caagaacaaaccttaatcgaccgttaccaagggcaaatggatctttatgctcaagccctt
gaaaccatttgggaacggccagttacacagaaaatgattatatctttagatacattaaaa
actttttttgtctaa
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