Aerococcus urinaeequi: APT62_05615
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Entry
APT62_05615 CDS
T04249
Name
(GenBank) ATP-dependent deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
aui
Aerococcus urinaeequi
Brite
KEGG Orthology (KO) [BR:
aui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aui03400
]
APT62_05615
Enzymes [BR:
aui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APT62_05615
DNA repair and recombination proteins [BR:
aui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
APT62_05615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ALZ87973
LinkDB
All DBs
Position
complement(1247415..1251131)
Genome browser
AA seq
1238 aa
AA seq
DB search
MNLQFILKTPTQNNLKSVYEDIDAYLRADVENQVFIITDDNMKFDLEMSVLRQMKAVQLN
AGHTTDNKHAGMMRLQVQSFKRLAWYLLQKQDSQSVRDVSDIGNIMVIGRVLADMKDDLL
VYRGEYDQIGFVEALADLFKELVNGQITSDVFLNSLSSYESSDQPLIQNQVKKMKELAAI
YGEYEKYLAGLTMVDRNVFAQLRQAISDQDLSKTRIIITGFDYFNAQELETIVAFLENCP
QVQIVLNLDQPYDFRTPDWYELFTVTGKTYNQLMQFVRKQEIPFANPIVAESDNSYADGF
KVLDHYLRTDNRIESGQVAQTDPAKTAVNQVMEIWEVPSTHMEADQVANEIYRLVADPNT
DYRYKDIQILSRDEDAYQHALQAALDANEIPYFTNFQEDMALHPLYRLMISLYRVYQGNW
RYQDVFDLLRSELLTPVDLGDLTNWNDPTFDSVEVVSDELSASKKEQIQFRDAIDLTENV
VLRNGYEGQFWWSKDRIWSYILVGEDGEKIGTKRDIAIEATANQVKAFVVGALSPLFDNW
KKDQTTEAAITYFYQFLTNNGIPTNLMNWRDSYLEAGQLQEARQHEQAWQTFIHMLDDYV
LLFGEEAFDLEYFFKILDLAFQNASYAMVPPTMDSVTIGSFDENKVDAKKITFLLGMSKY
ALPVVYEEKSLLTNEDRQLVVSQLDDLQALKQSADSKNNNEAYKAYLAFLSATDHLYISY
PLNNGDADTEGLSPMIGRIAEAFGIQTKYLRQPSDHAAEETLLKLGNGHTQVRYLLKAVA
QDAHGQQSLSQIWRPVYDQVVSNQSTAGFFKWLQSSLTYHNTVLPLTPELSRSLYGDILA
VSVSQLELYNRDPFSYYLKYGLKLKERPSFQLDSLQTGNYFHEMLDHFFKEVNQKDFDLA
NLSDGEVKEIVGKVTDKLNDPDVYPEYTVFKVNHRNSYLQESMKETIQLLVENMIKQRQA
VDVETIETEQRFGYTQNEDEEEETITHFTLANGQEVRLRGKIDRIDAVSQVENGLEQNFI
QVVDYKSSAHDVKFDQIYVGSQLQLYTYLKVALDQLNQGGQTALPLGAFYQRIFQPQVKI
EKQTDLTDKNIADQILADLKLSGYVRADYDLLEDIHSEGLEPGGKSSVYAVSRKKDGDFA
KAAKVLTKDELNKLLAFVEEKIVATAEQIVSGHIALNPLDDDPYIPSMTEPYRSVSMFDA
TDYTNKYRPNPSMDQDEFFQALMTDAHVAEEDQSDDEE
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacagtttattttaaagaccccgacacaaaataacctgaaatctgtatatgaa
gacattgatgcttatctaagagcagatgtcgaaaatcaagtctttattatcactgacgac
aatatgaaatttgatttagagatgtctgttttacgtcaaatgaaggcagtccagttgaat
gctggccatacaactgacaataaacatgctggcatgatgcgactacaagtgcagtctttc
aaacggttagcttggtatttattgcagaaacaagatagtcaatcagttagggacgtttca
gatattggtaatatcatggttatcggtcgcgttttagcggatatgaaagatgacttattg
gtataccggggtgaatacgaccagattggatttgtggaagccttggctgacttgtttaaa
gagttagtgaacggtcaaattaccagtgacgtctttttaaattcgttatctagctatgag
tctagtgaccagcccttgattcaaaatcaagtgaagaaaatgaaagaattggctgcaatt
tacggagagtatgaaaaatatttagcgggcttaaccatggtagaccgaaatgtttttgcc
caattgagacaggcaatttcagaccaagatttatctaaaacaagaattatcattacgggc
tttgattattttaatgcccaagagttggagacgattgttgccttccttgaaaattgtcca
caagtgcaaattgtgctgaatttagatcaaccttatgactttaggacgccggactggtat
gagttatttacggtaacagggaaaacttacaatcaattgatgcaattcgttagaaagcaa
gagattccatttgctaatcctatagttgctgaatcggataatagttatgcagatggtttt
aaagttttagatcattatctaagaacggacaaccgtattgaaagtggccaagttgcgcaa
actgatcctgctaaaacggcagtcaatcaggtcatggaaatttgggaagtaccgtctact
catatggaagctgaccaagtagccaatgaaatttatcgattagtggcagatccaaatacc
gattaccgctacaaggacatccaaatcctatctagagatgaggatgcctatcaacacgct
ttacaggcggctcttgacgccaatgaaattccttatttcactaatttccaagaggatatg
gctctccatccactttacaggctgatgataagtttgtatcgggtttaccaaggtaattgg
cggtatcaagatgtctttgatttactgcgtagtgaattattaacgccagttgatttgggt
gacttgaccaattggaatgatccaacttttgattcagtagaggtagtatcggatgaattg
tcagcttccaaaaaggagcaaattcaattccgtgatgcgatcgatttgacagaaaatgtt
gttttacgaaatggttatgaaggacaattttggtggtctaaagaccggatttggtcctat
attttagtgggggaagacggcgaaaaaatagggacaaagcgtgatattgcgatcgaagca
accgctaaccaggtaaaagcttttgttgttggggccttgtcgccactatttgacaattgg
aaaaaggatcaaacgactgaagcggctattacatatttctatcaattcctaaccaataat
gggattccaaccaatttgatgaattggcgggacagctatttagaggctgggcaattacaa
gaggcgagacaacacgaacaggcttggcaaacctttatccatatgttggacgactatgtc
ctcttatttggtgaggaagcatttgacttagaatacttctttaagattttagatttggcc
tttcaaaatgcaagctatgccatggtgccaccaacaatggactctgttacaattggctct
tttgatgaaaataaggttgatgcaaagaaaatcacttttcttttaggtatgtccaaatat
gccttaccggtggtctatgaagagaaatctcttttaaccaacgaggaccggcaattagtg
gttagtcaattagatgacttacaagccttaaaacaatcggcagatagtaagaataacaat
gaagcctataaagcttatttggcattcctgtctgccacagatcatttatatatttcctat
cccttgaataatggcgatgcggatactgaagggttgtcgccaatgatcggccgtattgca
gaggcttttggtattcaaaccaaatatctacggcaaccgtctgaccatgcagctgaagaa
accttgttgaaactaggtaatggtcacacccaagtccgttatctactgaaagccgtggcc
caagatgcccatggccaacaaagtttaagccagatatggcggcctgtatatgaccaggta
gtatccaatcaatctactgctggtttctttaaatggttgcagtctagtttgacctaccat
aatacggtactgccacttacaccagaattgtcccggtctttatacggggatattttggcc
gtatctgtttcccagcttgaactctataatcgagatcccttctcttattatttgaaatat
gggttgaaattaaaagagcgacctagctttcaattagattccttgcaaacagggaattac
ttccatgaaatgctggaccattttttcaaggaagtaaatcaaaaagattttgatttggct
aatctttctgatggcgaggtcaaggaaattgtagggaaagtgacggataagctaaatgat
ccggatgtctaccccgagtacacggtctttaaggttaaccaccgcaatagttacttgcag
gaatcaatgaaagagaccattcagttgctggttgaaaatatgatcaagcaacgccaagcg
gttgatgtagaaactatcgaaacggaacaacgatttggctacacccaaaatgaggacgag
gaagaagagaccatcacgcatttcactttagcaaacgggcaagaagttcgtttgcgcggt
aaaatcgaccggattgatgcggtgtcacaggttgaaaatggcctggaacaaaacttcatc
caagtggtggattataagtcatcggctcatgatgtgaaatttgaccagatttatgtaggg
tcccaattgcagctttatacttatttgaaggtggctttagaccagttaaatcaaggtggt
caaactgccttgccactaggtgctttctaccaacggattttccaacctcaagtgaaaatt
gaaaagcaaacagatttaactgacaaaaatattgcggatcaaattttggccgacttgaaa
ctgtcgggttatgtacgggctgactatgatctattagaagatattcatagcgaaggactt
gaaccaggtgggaagtcgagcgtttatgcggtgagccggaagaaagatggcgatttcgct
aaagctgccaaagtcttaaccaaggatgagttgaataagttgttagcctttgttgaagag
aagattgtggctacagcagaacaaattgtgtctggacatattgctttaaatccgctcgat
gatgatccgtacattccgtccatgactgagccttaccggtctgtatctatgtttgatgca
acggactacaccaataaatatcgaccaaatccgtctatggatcaggatgaatttttccaa
gccttaatgacagatgcccatgtagcagaggaggaccagtcagacgatgaagaatag
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