Aerococcus urinaeequi: APT62_08580
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Entry
APT62_08580 CDS
T04249
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aui
Aerococcus urinaeequi
Pathway
aui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APT62_08580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aui03019
]
APT62_08580
03009 Ribosome biogenesis [BR:
aui03009
]
APT62_08580
Enzymes [BR:
aui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
APT62_08580
Messenger RNA biogenesis [BR:
aui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
APT62_08580
Ribosome biogenesis [BR:
aui03009
]
Prokaryotic type
rRNA helicases
APT62_08580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
ResIII
NPP-6_helical
DUF5063
Motif
Other DBs
NCBI-ProteinID:
ALZ88493
LinkDB
All DBs
Position
complement(1851792..1853327)
Genome browser
AA seq
511 aa
AA seq
DB search
MKFNEMNLSKPLLRAVEEMGFEEATPIQSQTIPMALGGQDIFGQAQTGTGKTAAFGLPLL
EKVHETGGVQALIIEPTRELAVQTGEELYRLGKFKGIHTTTVYGGASIGHQIKLLKKNPP
VVIGTPGRILDLIKRGVLKLNNVETLVLDEADEMLKMGFVEDIESIIRELPTERQTLLFS
ATVPQEIKRIADNFMKDPATVHVKTKQMTADLIDQYYSRCKDYEKFDLLTRFMDVQNPEL
SIVFARTKRRVDEVARGLIERGYSAEGIHGDLSQDKRLGVLRNFKNGKLDILVATDVAAR
GLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKEGMSVTFVTSNEMSYLRTIEDLTKKQ
MSALRPPTTQEALSGQLSNVVKVVKELIEVEDTGMYQEAITYLSENYTEDEIALALVRSL
VKDPSSVKVEITPERPLPNRNKRNFHRNSSNRKNNGGGNRDRNGKGGGYKGDRKGGYKGN
AKDKNRNNYDRKKSNGGNKQSNGKSAEFKIR
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaatgaaatgaatctatcaaagccactgcttcgcgcagtcgaagaaatgggt
tttgaggaagcaacacctatccaatcccaaacgattccgatggcacttgggggacaagac
atctttggacaagctcaaacaggtactggtaaaacagctgcttttggtttgccattatta
gaaaaagttcatgaaactggtggcgtacaagccctaattattgaaccaactcgtgaatta
gctgtgcaaacaggtgaagaattataccgcctaggtaaatttaaaggaatccacacaaca
actgtatacggtggtgcgtcaatcggacaccaaatcaaattattgaagaaaaatccacca
gttgtaataggtacaccgggtcgtatcttagaccttatcaaacgtggtgtgttgaaatta
aacaatgtggaaacattggtattagatgaagcagacgaaatgttgaaaatgggctttgtt
gaagatatcgaatcaattattcgtgagttaccaacagaacgccaaacgctacttttctct
gcaacagtaccgcaagaaatcaaacgtattgcggataacttcatgaaagacccagcaact
gttcatgtcaaaacaaaacaaatgactgcggacttaattgatcaatattattcacgttgt
aaagactacgaaaaattcgacttattaacacgttttatggatgtacaaaatcctgaattg
tcaatcgttttcgcccgtacaaaacgtcgcgttgacgaagtggcacgtgggttaattgaa
cgtggctattcagctgaaggtatccacggtgatttaagtcaagataaacgtttaggggtt
ttacgtaacttcaaaaacggtaaattagatatcttagtagcgacagacgttgctgcacgt
ggtttggatatttcaggtgtaacacacgtttacaacttcgatattccacaagacccagaa
tcatacgttcaccgtattggtcgtacaggtcgtgccggtaaagaaggtatgtcagttaca
tttgttactagtaacgaaatgtcttacttacgtacgattgaagatttaaccaagaaacaa
atgtctgccctacgtccacctacgacacaagaagcattaagtggtcaattgtctaacgta
gttaaagtcgttaaagagttaattgaagtagaagatacaggtatgtatcaagaggcaatt
acttacttatcagaaaactatactgaagacgaaattgccttagcattagttcgttcatta
gtgaaagatccttcttctgtaaaagtagaaatcacaccggaacgtccattgcctaaccga
aacaaacgtaacttccaccgtaattcatcaaatcgcaaaaacaatggtggtggaaaccgt
gaccgtaacggcaaaggtggcggctacaaaggcgaccgtaaaggtggttacaaaggtaat
gctaaagacaaaaaccgtaacaactacgaccgtaaaaaatcaaacggtggtaacaaacaa
tctaatggtaaatcagcagaatttaaaattcgttag
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