Auritidibacter sp. NML130574: DCC27_000075
Help
Entry
DCC27_000075 CDS
T05590
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aul
Auritidibacter sp. NML130574
Pathway
aul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DCC27_000075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aul03019
]
DCC27_000075
03009 Ribosome biogenesis [BR:
aul03009
]
DCC27_000075
Enzymes [BR:
aul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DCC27_000075
Messenger RNA biogenesis [BR:
aul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DCC27_000075
Ribosome biogenesis [BR:
aul03009
]
Prokaryotic type
rRNA helicases
DCC27_000075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AXR72965
LinkDB
All DBs
Position
13875..15722
Genome browser
AA seq
615 aa
AA seq
DB search
MTESSQHMSVPENSTTSGHVTFSDLISDQRLLAPLEKLGYEKPSPIQAETIPLLLQGRDV
VGLAQTGTGKTAAFALPALARLLDTLEGDPEVQAPRILVLAPTRELALQVAEAFTSYAAE
IPQATVVPVYGGSAYGPQLAGLRRGAAIVVGTPGRVIDHLEKGSLDLSQMRYIVLDEADE
MLRMGFAEEVDRILSGTPEDKQTALFSATMPRAIQRISGDYLNDPAQVEIAAESTTAQNI
RQRYIQVSFPWKLEAMTRILETEDTDGIITFVRTRNMTEELTQKLQARGFRAAAISGDIP
QNIREKTVEDLRAGRIDILVATDVAARGLDVERISHVINYDIPHDTSSYVHRIGRTGRAG
RAGDAIILMTPRERHQLRAIEKATDQRVEEMQLPSLEEVNASRVQRFADQITATLGEEED
SNIASFRELVTTYVDEHNVAAVDVAAALAMMAQDGRPLFAEEPDLPPMKLDRGKKNRTAR
GHRKNHDRGVATPADGKATYWIAVGHKDRVRPGNIVGAIANEANLDAREIGDISIRPTHS
LVELPEKLSKEQLATLRDATVAGRRLNLRLDRGRPEDRGGLAPSRRDRETTSRREGRTAK
KKERWSKAKKRAAKK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatcatcacagcacatgtctgtgcccgaaaactccacgaccagtggccacgtg
accttctcggacctgatcagcgaccaacgactgttggctcccttagagaaactgggatat
gagaagccctcgccaattcaggccgaaaccatcccgctattgctccagggccgcgacgta
gttggtttagcccaaaccggtaccggcaaaacggccgccttcgcgcttccggccctggcc
cggttgctcgacactcttgagggggaccctgaggtccaggctccccgcattcttgtgctc
gctcccactcgtgagctggcgctgcaggtcgctgaagctttcaccagctacgctgccgaa
atcccgcaagccaccgtcgtcccagtttacggaggctcggcctacggccctcagctggca
ggactgcgacgtggcgccgccattgtcgtgggaacccctggacgcgtcattgaccatttg
gaaaaagggtccttggacctctctcagatgcgttacatcgtcttggacgaggctgacgag
atgttgcggatgggattcgcggaagaagtcgaccggatcctgagcggaacccccgaggat
aaacaaaccgcgctgttttcagccaccatgccacgcgcgattcagcggatctctggggac
tacctcaacgacccggcccaagtggaaatcgcagctgaatcaaccaccgcccagaacatt
cgtcagcgctacatccaggtgtctttcccgtggaaactcgaggccatgacccggatcctg
gaaaccgaggacaccgacgggatcatcactttcgtacgcacccggaacatgaccgaggaa
cttacccaaaaactccaggccagaggctttcgcgcggccgcgatatcgggcgatattcca
caaaatattcgagaaaagaccgtcgaagatctccgtgccggccgtatcgacattctggtc
gccactgatgtggccgcccgcgggctcgacgtggaacggatctcccacgtgatcaactac
gacattccgcacgacacctcttcctatgtgcaccgcatcggtcgcaccggtcgtgccgga
cgggccggggacgccatcatcctgatgaccccgcgcgaacgtcaccaactgcgagcaatc
gaaaaagctaccgaccaacgggtagaagagatgcaactgccatcccttgaagaagtcaac
gcctcccgggtacagcgttttgccgaccagattactgccaccctgggtgaggaagaagat
tccaatatcgcctccttccgcgagctggtcaccacctacgtcgacgaacacaatgtggct
gccgttgacgtcgcagcggcgttggcgatgatggcccaagacggccgacccctgttcgcc
gaagaacccgatctaccccccatgaaactcgatcgggggaagaaaaaccgcacggcacgt
ggccaccgcaagaaccacgatcgtggggtggctaccccagccgatggcaaggccacctac
tggatcgcagtgggacataaagaccgcgtgcgtcctggcaatatcgtcggcgctatcgcc
aatgaggccaaccttgatgcccgcgagatcggcgacatcagtattcgtcccacgcactcg
ctggtggagttacccgaaaagctctccaaagaacagcttgctaccctgcgcgatgccacg
gtggccggacgacgtcttaacctgcgattggaccgggggcgtccggaagaccgtggtggg
ctcgctccaagtcgtcgagatcgtgagaccacctcgcgtcgtgagggccggaccgcaaag
aagaaggaacgctggtccaaggcgaagaagcgggctgcgaagaaatga
DBGET
integrated database retrieval system
