Auritidibacter sp. NML130574: DCC27_000465
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Entry
DCC27_000465 CDS
T05590
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aul
Auritidibacter sp. NML130574
Pathway
aul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DCC27_000465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aul03021
]
DCC27_000465
03400 DNA repair and recombination proteins [BR:
aul03400
]
DCC27_000465
Enzymes [BR:
aul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DCC27_000465
Transcription machinery [BR:
aul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DCC27_000465
DNA repair and recombination proteins [BR:
aul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DCC27_000465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
DUF6327
Motif
Other DBs
NCBI-ProteinID:
AXR74942
LinkDB
All DBs
Position
79674..80702
Genome browser
AA seq
342 aa
AA seq
DB search
MLIAQRPTLTEEPVSTQRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSIRIDGVL
HEFSTVNGVNEDVTEIILNIKQLSVSSENDEPVVAYLRKQGPGEVTAADITAPAGVEIHN
PELHIATLNEKGKFDMELTIERGRGYVTATQNKTPDAEIGRIPVDSIYSPVLKVTFKVEA
TRVEQRTDFDKLVLDVETKESIAPRDALASAGSTLVELFGLARELNVAAEGIEVGPSPAD
DTVAADMALPIEELEMTVRSYNCLKREGIHTVGELVARSETDLMDIRNFGAKSIDEVKEK
LAELGLSLKDSGPASFDPLATDSQEYNGGEEYNGDFQSYDQY
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcacagcgccccacgttgactgaagaacccgtatcaactcaacgctcgcgg
ttcgttattgaacccttggagcctggttttggttatacactgggtaactcgctacggcgg
accctgctgtcatccatacccggtgcgtccgtgaccagcatccgcatcgatggcgtgctt
cacgagttttctaccgtcaacggtgtgaacgaagacgtcaccgaaattatcctcaacatc
aagcagctctcggtttcctcggaaaacgatgagccggtcgtggcttacctgcgcaagcag
ggtcccggcgaggtaactgccgctgatatcactgcgccggcaggcgttgagatccacaac
cccgaactgcatatcgcgaccctgaatgagaaggggaagttcgatatggagctgaccatt
gagcgcggtcgtggctacgttaccgctactcagaacaagaccccggacgctgaaatcgga
cgaattccagtcgactccatctactctccggtcctgaaggtcaccttcaaagtcgaagcc
acgcgtgttgagcagcgcaccgactttgacaagttggtactggatgtggagaccaaggaa
tccattgctccgcgcgacgcgctggcttcggccggttccacgctggtggagctgttcggt
ttggcccgtgagctcaacgttgccgccgaaggtattgaggttggcccttcgccggccgat
gataccgtcgctgccgatatggcccttcccatcgaggagttggagatgaccgtgcggtct
tacaactgcctgaagcgtgaagggatccataccgtcggtgagctggtggctcgttctgag
accgacctgatggatatccggaacttcggtgcgaagtccattgacgaagtgaaagagaag
cttgctgagctgggcctgtccttgaaggactctggaccggcaagcttcgatcctctggct
accgactcccaggagtacaacggcggcgaagagtacaacggtgacttccagtcctacgac
cagtactaa
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