Auritidibacter sp. NML130574: DCC27_004355
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Entry
DCC27_004355 CDS
T05590
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aul
Auritidibacter sp. NML130574
Brite
KEGG Orthology (KO) [BR:
aul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aul03016
]
DCC27_004355
Enzymes [BR:
aul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DCC27_004355
Transfer RNA biogenesis [BR:
aul03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DCC27_004355
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AXR75040
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Position
948891..950153
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AA seq
420 aa
AA seq
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MILTTNAESEAPVLITEPAEGIPELTDTPEGLTECAEALRAGSGPVAIDTERASGFRYGQ
RAFLVQLKREGSGIWLIDPEPLENLDIIQQAIGDTEWILHAATQDLGCLADCGLRPCTLF
DTELAGRLCGFQKVNLAALLQRTLGITLAKEHSAADWSQRPLPEQMRNYAALDVEYLVPL
RAQMIRTLRRQDKLEIAAEEFEALTAWQPPEPPHEPWRRTSGIHRVKSPQQLAIVRALWH
ARDELGRQEDVFPGRLLPDRAIIAAATAQPATASELMNTKGFTGRAAGREKDRWLEAIRR
GVAEGRDPATRPEKKPAGSGGPPPVKRWKSLDELAARRFATCKVRLTRQAEAMGVPLENL
LLPSTLRDLCWRPPSPITPETVEEYLKDRGARNWQVWACSAIITVALLDPDPWDSDDEQP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atcatcctgaccacaaacgcagaatctgaggcaccggttctgatcaccgagccggccgag
ggcatcccagaacttaccgacacgcccgaagggctcaccgaatgcgctgaagcgctccgc
gccggtagcggaccggtggccatcgataccgaacgagcctccggatttcgctacggtcag
cgagcattcttggtccaactcaagcgtgaaggctccggcatttggctcatcgaccccgaa
cccttggagaatttggacattattcagcaagccatcggtgacaccgagtggatcttacac
gctgccacgcaagacttagggtgtctggctgactgtggattacgtccctgtactctcttc
gataccgagctagccggacgcctgtgcggcttccagaaagtaaatctggccgcactgcta
cagcgtacgttgggaataaccttggccaaggagcattcagctgccgattggtcgcagcgc
ccgttgcccgagcagatgcgtaactacgccgccttggatgtggagtatttggtcccgtta
cgcgcacagatgattcgcacactacgtcggcaggacaagctggagatcgctgccgaagag
ttcgaagcgttgaccgcttggcaacccccggagccccctcacgagccctggcggagaacc
tccggtattcaccgggtgaaatcaccacaacagctggccattgtccgtgccctgtggcat
gcccgtgatgaactgggccgtcaggaagatgtcttcccggggcggctactacccgatcgg
gcgattattgccgccgcgaccgcacaacctgcaaccgcaagtgagctgatgaacaccaag
gggttcaccggccgggctgccggccgggagaaggaccggtggttggaggcgattcggcgc
ggggtggccgaaggacgggatcccgcaacgcgaccggagaagaaaccggctggctccggt
ggccctccgccggtgaaaaggtggaagtctctcgacgagctggccgctcggcgattcgcc
acgtgtaaggtgcgattgactcgccaagccgaggcgatgggcgtgccgttagagaacctc
ttactcccctcgacgctacgagatctctgctggcgtccgccctcacccattaccccggaa
accgtcgaagagtatctcaaagaccggggtgcccgtaactggcaggtctgggcctgctcg
gcaatcattaccgttgcattactagacccggatccatgggacagcgatgacgagcagccc
tga
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