Auritidibacter sp. NML130574: DCC27_005370
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Entry
DCC27_005370 CDS
T05590
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aul
Auritidibacter sp. NML130574
Brite
KEGG Orthology (KO) [BR:
aul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aul03016
]
DCC27_005370 (truB)
Enzymes [BR:
aul01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DCC27_005370 (truB)
Transfer RNA biogenesis [BR:
aul03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DCC27_005370 (truB)
Prokaryotic type
DCC27_005370 (truB)
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Ortholog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AXR75069
LinkDB
All DBs
Position
complement(1189629..1190531)
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AA seq
300 aa
AA seq
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MVLVDKPTGWTSHDVVAKLRKLAGTRKVGHAGTLDPMATGLLVVGFNKATRLLTHITGTN
KTYAATIRLGVNTTTDDADGEVIHRRYANAVTRDRLEVAIAELTGEIDQIPSAVSAIKVG
GKRAYQRVRDGEKIELPARRVTVSRFKVTGVHRLDKGKILDIEVAIDCSSGTYIRALARD
LGESLNTGGHLIALRRTRVGPFTIDKAHTIEQLGSRFDYCELSQACSELFPVREVCDHEA
EALSFGRLVSPNDDDRCYAARHGGDTVIALIENARTKTGYGAKPQVVFVTDYRIHTEGEA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ctggtgctggtggacaaaccgaccggctggacctctcatgatgtggtggccaagctacgc
aaactcgctgggacgcggaaagtcggtcacgcaggaaccttggacccgatggctacaggc
ttactggtcgtggggttcaataaagccacccgccttttgacccacatcaccggtacgaac
aagacctatgccgcaaccatccggctcggtgtcaataccacgaccgatgatgctgacggt
gaggtcattcatcgcagatacgccaacgcggtcactcgagaccgtcttgaggtcgccatc
gcagaactgacgggggaaatcgatcagatcccttcggcagtgtctgccatcaaggttggt
ggcaaacgagcctatcagcgcgtgcgtgacggtgaaaagatcgagctaccggcacgtcgg
gtcaccgtatctcggttcaaggtcaccggagttcatcgtctcgacaagggaaagattctt
gatatcgaggtcgctatagattgctcttcgggtacctatatccgggctctcgccagggac
ttgggcgagtctttgaacactggcgggcacctgatcgcgctgcgccgcacccgggtggga
ccctttactatcgataaggcccacaccatagaacagctgggaagtcggtttgactactgt
gagctatcacaggcctgttccgagctgttcccggtccgtgaagtctgcgaccacgaggcg
gaagcgctgagtttcgggcgactggttagccccaatgacgacgaccgatgctacgcagct
cgccatggtggcgacaccgtgatcgcgctgatcgaaaacgctcgtaccaaaaccggttac
ggggccaagcctcaggtagtgttcgtcaccgattatcgcatccacacagaaggtgaggcc
tga
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