Auritidibacter sp. NML130574: DCC27_007025
Help
Entry
DCC27_007025 CDS
T05590
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aul
Auritidibacter sp. NML130574
Pathway
aul03420
Nucleotide excision repair
aul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DCC27_007025 (pcrA)
03430 Mismatch repair
DCC27_007025 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aul03400
]
DCC27_007025 (pcrA)
Enzymes [BR:
aul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCC27_007025 (pcrA)
DNA repair and recombination proteins [BR:
aul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DCC27_007025 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DCC27_007025 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
UPF0149
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AXR74088
LinkDB
All DBs
Position
complement(1540620..1543076)
Genome browser
AA seq
818 aa
AA seq
DB search
MASMITPSSSDPDTLIADLNDQQRAAVTHRGGPLLIVAGAGSGKTKVLTHRIAHLLATGE
ARPWEFLAITFTNKAAREMRERIEGLIGPDAHKMRISTFHSSALRILRAEASTVGLKSNF
SIYDAADSLRLISQLVKVADLDPKRVKPKSIQHKISSLKNDLVDADEFASNNSGDPFQQA
VAEVYTEYTARLRQANAMDFDDLISTTVNMFRAFPAVLDNYRRRFRYVLVDEYQDTNHAQ
YQLVRLLTGEPGDPSGCETSGGQLTVVGDSDQSIYAFRGADISNIIEFERDYPDATVINL
EQNYRSTQNILDAANAVISHNPSREAKRLWTDAGTGAALIGYAGENESDEAGWVADKIDE
LIDNDEAIPEDIAVFYRTNAQSRALEERLISAGIPYRVIGGTRFYDRKEIKDALAYLRVI
DNPDDDVNLRRILNEPKRGIGDRSEAALAVLQDRERISFFDALHRADQAPGIGSRAVKKV
QEFAQLLDDLQQLATTESPARVLEAVLEQTGMLHALRSSEDLQDESRADNLGELVAVVRD
FEKTHPDGDLSQFLEQVALVADTDQLPTPVETDTEGQDLAEQWGQVTLMTLHTAKGLEFP
VVFLTGMEHGVFPHARSMGDTQELAEERRLAYVGLTRAEKRLYLSRSESRSLWGQHQFNP
PSQFLTEIPDTLIEWEREGRLNGVDTRGSWNDIGAGLGFGAPGSRYQKRFTGSHWGASTS
RSHYGKPGQSSAPRAGATGITEAQERAEVVRGEKPTRVVPDHEVISLNPGDHVKHKSFGT
GVVTAISGSGDKTVATVAFSGSEKRLLLRYAPVEKISF
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgatgatcaccccctcgtcttcggatcctgacacgctgatcgctgacctgaac
gaccaacagcgggccgcagtcactcaccgcgggggaccattgctgatcgtcgccggagca
ggctcgggtaaaaccaaggtgctcacccaccgcattgctcatttactggccaccggggaa
gctcgtccctgggagttcttggccattaccttcaccaataaggccgcccgagaaatgcgc
gaacgcatcgaagggctgatcggtcctgatgcccacaaaatgcggatctcgacctttcac
tcctcagcgctacgcatcctaagagctgaagctagcaccgtgggattgaaatccaatttc
tccatctatgatgctgctgattccttgcggttgataagccagcttgtcaaggtggcggac
ctggatcccaaacgggtgaaacctaaatcgattcagcacaagatttcctcgctgaagaat
gatttggtggatgccgacgagttcgcctcgaacaacagcggggaccctttccagcaagcg
gtggccgaggtctacaccgaatacaccgcgcgcttgcgtcaggcgaatgcgatggatttc
gacgacctgatctctaccactgtcaatatgttccgcgctttccccgctgtgctcgataac
taccgtcgccggttccgttacgtgctggtcgatgagtaccaagacaccaaccatgcccag
tatcagctggtccgattgctcaccggggaacccggagacccctccgggtgtgagaccagt
ggggggcaactgactgtcgtcggggactccgaccagtcgatttatgccttccgcggtgcc
gatatcagcaacattatcgagtttgagcgggattaccctgatgccaccgtgatcaatctg
gagcagaactaccgttccacccagaacattctcgacgccgctaacgcggtgatctcgcat
aatccctctcgagaggccaaacggttgtggaccgatgctgggaccggggcagcgctgatc
ggttacgcgggcgagaacgaatcggatgaagccggctgggtggccgataagatcgatgag
ctgatcgacaatgatgaggcgatccccgaagacatagcggtcttctaccgcacgaacgcg
cagtcccgtgcgctggaagaacgcctcatctccgcggggatcccttaccgggtgatcgga
ggaacccgattctatgatcgcaaagaaattaaagatgccctggcgtatttgcgcgtgatc
gataatcccgatgacgacgtgaaccttcgccggattctcaacgagcccaaacgcggtatt
ggtgaccgctccgaagcggccttggcggtactacaagaccgagaacgcatcagtttcttt
gacgcactccaccgcgccgatcaagcacccgggattgggtctcgagccgtgaagaaagtc
caggagtttgcccagttattggacgacctgcaacagctggccacgaccgaatccccggcc
agggtgctcgaagctgtattggaacaaactgggatgttacacgcgctacgctcctcagaa
gacctccaggacgaatcccgggccgataacctcggagagttggtggcggtggtgcgggac
ttcgagaaaactcaccccgacggagatctgagccagttcttggaacaagtcgccctggtg
gccgataccgatcaactgcccacccctgtcgaaaccgacactgagggtcaggacttggct
gagcagtggggccaagtaaccttgatgaccttgcataccgctaaaggtttggagttcccg
gtggtatttttgaccgggatggaacacggcgtcttcccacacgcccggtcgatgggggac
actcaagagctggccgaagagcgccgactggcctatgtggggctgacccgggccgaaaag
cgactgtacctgtcccggtccgaatcccgttcgctatggggtcagcatcagttcaacccg
cccagccaattcctcaccgagattcccgacaccctcatcgaatgggaacgagaaggacgc
ctgaacggcgtcgacacgcgtgggtcctggaacgatatcggtgccgggctaggatttggc
gcccccggatctcggtatcaaaaacggttcactggctcccattggggcgcttcaacctca
cgcagccactacggcaagcccggtcagagttctgcgccccgggctggggctaccgggatc
accgaggcgcaagaacgcgccgaggtggttcgaggcgaaaaaccgacccgagtggtgccc
gaccacgaggtcatcagcctcaaccccggagaccacgtcaaacacaaaagcttcggtacc
ggggtggtcacagccatctctggcagtggagacaagaccgttgccacggtggcgttctcc
ggttcggagaaacggctgttgctacgctacgccccagtagaaaaaatctccttctag
DBGET
integrated database retrieval system
