Auritidibacter sp. NML130574: DCC27_007090
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Entry
DCC27_007090 CDS
T05590
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
aul
Auritidibacter sp. NML130574
Pathway
aul03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DCC27_007090
09124 Replication and repair
03420 Nucleotide excision repair
DCC27_007090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aul03021
]
DCC27_007090
03400 DNA repair and recombination proteins [BR:
aul03400
]
DCC27_007090
Enzymes [BR:
aul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCC27_007090
Transcription machinery [BR:
aul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DCC27_007090
DNA repair and recombination proteins [BR:
aul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DCC27_007090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AXR74099
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All DBs
Position
1555019..1556689
Genome browser
AA seq
556 aa
AA seq
DB search
MNSPAPEPTGAIIVQSDRSILLELQHPAADDARRALAQFAELERAPEHVHTYRMTALGLW
NARAAGVDAEQVIDTLFTHSRYPLPQNLLIDIAELMSRYGRLALTVDPQHGLVLRSDDAA
VLEEVLRAQTTRDLVGAQLDGYTVVVHSTARGELKQALVQLGWPADDQAGYVEGTAFPIQ
LTENETWQLRDYQRMAVDNFFATGSGVVVMPPGSGKTLVGAAALAASSTIALVLVTNTVS
ARQWKAELLARTTLTETDVGEYSGSKKQIRPVTIATYQVLTTRRGGIYPHLELVNDHDWG
LIIYDEVHLLPAPIFRMTADLQARRRLGLTATLVREDNRADEVFSLIGPKRYDAPWKDLE
AQGWIAPASCTEIRVTLSAEDRMGYAISDRGDQYRWAATAESKMPVITELVDFHRYEQLL
VIGQYVDHLEAIGDAIDAEVITGSTSVAQREKLFNAFRAGQVQRLVVSKIANFSLDLPEA
TVAIQVSGAFGSRQEEAQRLGRLMRPKSDGRNAYFYTVVSRDTVDQQYAASRQRFLSEQG
YSYRILDAGDLPDHLP
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaccagcgcctgaacccaccggggcgatcatcgtccaatccgatcgcagtatt
ctgctcgagctccaacatcctgccgccgacgacgcccggcgggccctggcccaatttgcc
gagctcgagcgcgcgcccgagcatgtccatacctatcgcatgaccgcgctgggcttgtgg
aatgcgcgggcggcgggagtggacgctgagcaagtcatcgatacgctgttcacccattcg
cgctatcccctaccgcagaacctgctgatcgatattgccgagctgatgtcgcggtatgga
cgactcgctctgaccgttgacccccaacacgggctcgtgttgcgtagcgatgatgccgcg
gtcctggaagaagtgctccgtgctcagaccacccgggacctggtgggtgcacagttagat
ggctacacggtggtagttcattccaccgcccgcggtgagctcaaacaggccctggtccag
ctgggctggccggccgatgaccaggccggttacgtcgagggcaccgcattcccgatccag
ctcaccgagaacgaaacctggcagttgcgcgactaccagcggatggcggtggacaacttc
ttcgcgaccggttccggggtggtggtgatgcctccgggctcgggaaaaaccttggtgggg
gcggccgcattggctgcctccagtaccattgccctggtgttggtgaccaatactgtctcg
gctcgacagtggaaagccgaactgctggcccgcaccaccctgaccgagactgatgtgggt
gagtattccggatcgaagaaacagatccgcccggtcaccatcgccacctaccaggtgctg
accactcgccgtggtggcatctatccgcaccttgagctggtcaacgatcacgactggggg
ctgatcatctacgacgaggttcacctcttgccagccccgatcttccggatgaccgcggat
ctgcaggctcggcgccggttgggactgaccgccactctcgtgcgtgaagacaatcgcgcc
gatgaggttttttcgctgatcggcccgaaacgctatgacgcaccgtggaaagaccttgag
gcacaaggctggatcgccccggccagttgcaccgaaattcgggttactctctcagccgag
gaccggatggggtacgccatcagtgaccgtggcgatcaatatcgttgggctgccaccgcc
gagtccaagatgccggtcattactgagctggttgacttccaccgatacgagcaactactg
gtcattggtcagtacgtggatcacctcgaagccatcggggatgccatcgacgctgaggtc
atcaccgggtcgacctcggtggctcaacgggagaagctttttaatgctttccgcgccggg
caagtgcaacggctcgtggtgtctaaaattgcaaacttttccctggacctgcccgaagca
acagtcgccatccaggtctcgggggcctttggctctcgccaagaagaagcacagcgttta
ggtcgactcatgcgccccaaatccgatggacgcaatgcgtacttctatacggtcgtcagc
cgcgacaccgtcgaccaacaatatgccgcctcccggcagcgcttcttgagtgagcaaggc
tatagctatcggatcctggatgccggcgatctgccagaccacctaccctga
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