Aurantimicrobium photophilum: AURMO_00321
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Entry
AURMO_00321 CDS
T05480
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aum
Aurantimicrobium photophilum
Brite
KEGG Orthology (KO) [BR:
aum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aum03032
]
AURMO_00321
03400 DNA repair and recombination proteins [BR:
aum03400
]
AURMO_00321
Enzymes [BR:
aum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AURMO_00321
DNA replication proteins [BR:
aum03032
]
Prokaryotic type
DNA Topoisomerases
AURMO_00321
DNA repair and recombination proteins [BR:
aum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AURMO_00321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AWR20939
UniProt:
A0A2Z3RVU1
LinkDB
All DBs
Position
293809..296643
Genome browser
AA seq
944 aa
AA seq
DB search
MSSSRKLVIVESPAKAKTIGKYLGDNYEVLASVGHIRDLPKPSELPADMKKGPFGKFAVN
VEDNFEPYYVVSENSKKTVAELKKALKDADELYLATDEDREGEAISWHLLQVLKPKVPVH
RMVFHEITKEAIQAAQENTRELDTALVDAQETRRILDRLYGWEMSDVMRRRVGPGTSAGR
VQTVALRLVVDRERERMAFNSANYWDLLATLGTSTEVSTQFEAKLVRVGGNTIASGKDFD
DNGQLTTKATLLSEEAATALAAALREASTEIVVAGLETKPYTRRPSAPFTTSTLQQEASR
KLKFSSKQTMSVAQGLYENGYITYMRTDSPSLSGQAIAAARAQATTLYGADQVADAPRQY
SGKSKNAQEAHEAIRPAGETFKTPAELQNVLRGNEWKLYDLIWKRTVASQMADAKGQTAT
VTAKATPASGDAVEFTASGTVITFRGFLNAYEESTDEERNAQDAQAEAKLPVMTEGQKLV
LADVEAKGHDTTPPPRYTEATLVKKLEELGIGRPSTYASILGLIVDRGYVTPKGSAFVPA
WVAFSIVRLMQEHYTDLVDYAFTAEMEEDLDKIAGGEGTGSQWLKKFYFGEPGHHGLREI
LDNIGDIDPRELNTFRIGENGAAIRVGKYGPYIEVTNPDAAEDEKPRIVNIPLDMAPDEL
TPEKVQELIDAPIVTDRVLGVNPENGKTVVSKDGRFGPYVTELEPEPEVALDEAEIDPAT
GEVVEVKKKKRVAKAEVIKPRTASLFKSMDPGTVDLETALKLLNLPREVGADPETGEMIT
SQNGRYGAYLKKGTDTRSLENEDQIFAIDLAGALELFAQPKYGARKAASAIKEFDADPES
GKPIKIKDGRFGPYVTDGTTNATIPRGEVPEEIDFDRAVELLAIKRAKGPVVRKKAPAKK
AAAKKPAAKKATKKVGDTIVVKKAGAKKAATTLGKSGVSSKASE
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
ttgtccagctctagaaagctcgtcatcgtcgagtcaccagccaaagccaagaccattggt
aagtacctgggcgacaactacgaggtgctcgcatcggtcggtcacatccgtgacttgccc
aagcccagcgagcttcctgcggacatgaaaaagggacccttcggcaagttcgctgtgaac
gtcgaagacaacttcgagccctattacgttgtctctgagaactctaagaagacggtggcg
gaactcaagaaggctctcaaggatgccgacgagctttacctcgcaactgatgaggaccgc
gaaggtgaagcgatctcctggcacctgctccaggtgctcaagcccaaggttcccgttcac
cgcatggtgttccacgaaatcaccaaggaagctattcaggctgcccaggagaacactcgt
gagctcgacacagctctggtagatgctcaggaaacccgccgtattctcgaccgcctctat
ggctgggagatgtcggatgtgatgcgtcgccgcgttggtcctggaacctcagctggtcgt
gtccagaccgttgcattgcgtttggttgtagaccgtgagcgtgagcgtatggcgttcaac
tccgccaactactgggatctgcttgcaactctggggacctcaacagaggtgtccacgcag
ttcgaagccaaactcgttcgtgtcggcggcaacaccattgcctcgggtaaagactttgat
gacaacggtcagctgaccaccaaggccactctgctcagcgaagaagccgcgactgcgctc
gccgcagcactgcgtgaagcaagcaccgagatcgtcgtggcaggtctggagaccaagccc
tacacccgtcgtccttccgctcccttcaccacttcgaccctgcagcaggaagcttcgcgc
aagctcaagttctcttcgaagcagaccatgagcgtggcacagggcctttacgaaaacggt
tacatcacctacatgcgtacggactcgccttccctctcgggacaggcgattgcggcagct
cgtgctcaagccaccacgctctatggagcagaccaggttgcagatgctccccgtcagtat
tcgggcaagagcaagaacgctcaagaagctcacgaagctattcgccctgctggtgaaacc
ttcaagactcccgcagaacttcagaatgttctccgtggcaacgagtggaagctctatgac
ctgatttggaagcgcactgttgcttcccagatggcagatgccaagggtcagaccgcaacc
gtcaccgcaaaggcaacccctgcatccggagatgctgtggagttcaccgccagcggcacc
gtcatcaccttccgcggcttcctcaacgcctatgaagaaagcactgacgaagagcgcaac
gctcaggacgctcaagcagaagccaagctcccagtgatgaccgaaggtcagaaactcgta
cttgctgatgttgaggccaagggccacgacaccacaccacctcctcgttacaccgaagca
actctggtgaagaagttggaagagctgggcattggccgcccctccacctacgcatccatt
ctgggtctgatcgtggaccgcggctatgtcactcctaagggttcagcattcgttccagcg
tgggttgcgttctccatcgttcgcctcatgcaggagcactacaccgacctggttgactac
gccttcactgccgagatggaagaagatctcgacaagattgctggtggcgaagggaccggt
tcacagtggctgaagaagttctacttcggagagcctggccaccacggactgcgcgaaatc
ctcgacaacatcggcgatatcgatccccgtgagctcaataccttccgcattggcgagaat
ggtgcagctattcgcgtgggcaagtatggtccctacatcgaggtgaccaaccccgatgct
gccgaagatgagaagccccgcatcgtcaacattcccctggatatggcacccgacgagctc
acccctgagaaggttcaagaactcatcgatgcgcccattgtcaccgaccgtgtgctgggt
gtgaacccggagaacggcaagaccgttgtgtccaaggacggtcgttttggaccctatgtg
accgagctcgagccagagcctgaagttgctcttgacgaggcagagattgaccctgccact
ggcgaggtcgttgaagtcaaaaagaagaagcgcgtggccaaggctgaggtcatcaagcct
cgcaccgcttccctcttcaagagcatggatcctggaactgtggatttggagactgctctc
aagcttctcaaccttcctcgtgaagtgggtgcggatcctgagaccggcgaaatgatcacc
tcgcaaaatggtcgctacggcgcctacctcaagaagggcaccgacactcgctcgctcgag
aacgaagatcagatcttcgcgatcgacctcgctggtgctctcgagctgtttgcgcagccc
aagtatggagctcgcaaggcagccagtgcgattaaggaattcgacgctgaccccgaaagc
ggcaagcccatcaagatcaaggatggtcgtttcggtccctacgtcaccgatggcaccacc
aacgccacgatccctcgcggtgaggtgcctgaagagatcgacttcgaccgtgcggttgaa
cttctggccatcaagcgagccaagggacccgttgttcgcaagaaggctcctgccaagaag
gccgctgcaaagaagccagctgccaagaaggcaaccaagaaggtcggcgacaccatcgtg
gtgaagaaggccggcgcaaagaaggctgccaccaccctaggcaagtcaggcgtctcttcc
aaggctagcgagtaa
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